RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR1D2P34982 312 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CBX2Q14781 532 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 MTFR2Q6P444 385 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SLC24A5Q71RS6 500 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ATAD1Q8NBU5 361 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 C15orf40Q8WUR7 153 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 UTP4Q969X6 686 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 KXD1Q9BQD3 176 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ZNF649Q9BS31 505 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ANKRD60Q9BZ19 345 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TM9SF3Q9HD45 589 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ZDHHC7Q9NXF8 308 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 KCTD5Q9NXV2 234 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 PCDHGA12O60330 932 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TSPAN1O60635 241 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 HPRP00739 348 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 UNGP13051 313 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 BRCC3P46736 316 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TREML2Q5T2D2 321 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ELP2Q6IA86 826 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 LHFPL3Q86UP9 236 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RHBDF1Q96CC6 855 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RIOK2Q9BVS4 552 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 NIFKQ9BYG3 293 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 ADAM7Q9H2U9 754 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 C3orf14Q9HBI5 128 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 MRTO4Q9UKD2 239 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 POU2F3Q9UKI9 436 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 PCDHB9Q9Y5E1 797 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ATP6V1G2-DDX39BF2Z307 99 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CILPO75339 1184 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ATE1O95260 518 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SIX3O95343 332 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 APODP05090 189 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 FCER2P06734 321 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 NAT1P18440 290 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TUBG1P23258 451 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ADRA1BP35368 520 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CXCR3P49682 368 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 YBEYP58557 167 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 KCNJ11Q14654 390 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CLEC12AQ5QGZ9 265 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 C9orf64Q5T6V5 341 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CAPN13Q6MZZ7 669 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 TSPAN33Q86UF1 283 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RELL1Q8IUW5 271 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 GJD3Q8N144 294 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SAMD12Q8N8I0 201 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 OR4C6Q8NH72 309 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 C7orf34Q96L11 122 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ZSWIM3Q96MP5 696 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ABCG5Q9H222 651 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RNF121Q9H920 327 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ARHGEF4Q9NR80 690 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 PHPT1Q9NRX4 125 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 FAM118AQ9NWS6 357 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SMIM28A0A1B0GU29 152 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TEX51A0A1B0GUA7 166 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 C2orf92A0A1B0GVN3 265 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SLC1A7O00341 560 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TXNL1O43396 289 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RASGRP1O95267 797 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 VNN2O95498 520 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 PAHP00439 452 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 PCSK2P16519 638 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 NDUFV1P49821 464 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 GBX2P52951 348 aaPredicted RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 PRKCDQ05655 676 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 FAM214AQ32MH5 1076 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TSTD2Q5T7W7 516 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TIFABQ6ZNK6 161 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 KCTD9Q7L273 389 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RAVER1Q8IY67 606 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 PYROXD2Q8N2H3 581 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TMEM151AQ8N4L1 468 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 OR7G2Q8NG99 324 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 FBXO27Q8NI29 283 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CDK15Q96Q40 435 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 GON7Q9BXV9 100 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CTPS2Q9NRF8 586 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 DNAJC27Q9NZQ0 273 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TNFRSF10DQ9UBN6 386 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RBMXL2O75526 392 aaKnown RBP10.16□□□□□ -0.78
VCL-201ENST00000211998 OPN1SWP03999 348 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 C4BPAP04003 597 aaKnown RBP10.16□□□□□ -0.78
VCL-201ENST00000211998 RHOQP17081 205 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 ENGP17813 658 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 SCARB2Q14108 478 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 FAM182AQ5T1J6 154 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 SDHAF4Q5VUM1 108 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 AGAP6Q5VW22 663 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 ALDH16A1Q8IZ83 802 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 Q8N9G6 341 aaPredicted RBP10.16□□□□□ -0.78
VCL-201ENST00000211998 ZNF248Q8NDW4 579 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 ADAMTS15Q8TE58 950 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 PEX13Q92968 403 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 AGAP4Q96P64 663 aa10.16□□□□□ -0.78
VCL-201ENST00000211998 ST6GALNAC4Q9H4F1 302 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms