RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TMEM74Q96NL1 305 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 PITHD1Q9GZP4 211 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-201ENST00000011700 OR2AG1Q9H205 316 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ASB6Q9NWX5 421 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 RREB1Q92766 1687 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF646O15015 1829 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-201ENST00000011700 SLC34A2O95436 690 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 CYP2B6P20813 491 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 CCR10P46092 362 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 KLK7P49862 253 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 PHC1P78364 1004 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 MLLT1Q03111 559 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-201ENST00000011700 CAPSQ13938 189 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 TBRG1Q3YBR2 411 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 NOMO2Q5JPE7 1267 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 C9orf57Q5W0N0 161 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 CRYBG2Q8N1P7 616 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 CBR4Q8N4T8 237 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ABCG4Q9H172 646 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 DCSTAMPQ9H295 470 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 GLOD4Q9HC38 313 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 TOR1BO14657 336 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 INSIG1O15503 277 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 COL1A1P02452 1464 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MC4RP32245 332 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PERM1Q5SV97 790 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 REEP3Q6NUK4 255 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TREML1Q86YW5 311 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CMTM1Q8IZ96 169 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RBM15BQ8NDT2 890 aaKnown RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 GSTCDQ8NEC7 633 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RHEBL1Q8TAI7 183 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 UPRTQ96BW1 309 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CASD1Q96PB1 797 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PLIN4Q96Q06 1357 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MROQ9BYG7 248 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 HOXD1Q9GZZ0 328 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TAS2R3Q9NYW6 316 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CFAP97Q9P2B7 532 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CPNE7Q9UBL6 633 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 LRP5LA4QPB2 252 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DPPA5A6NC42 116 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ALDH3B2P48448 385 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SRPXP78539 464 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 EIF4HQ15056 248 aaKnown RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 FAM174BQ3ZCQ3 159 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CRTC2Q53ET0 693 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 KCTD8Q6ZWB6 473 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 LINGO2Q7L985 606 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PIGWQ7Z7B1 504 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 C14orf80Q86SX3 495 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 IQCF2Q8IXL9 164 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 NXPE1Q8N323 547 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MALSU1Q96EH3 234 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 POLMQ9NP87 494 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 HPF1Q9NWY4 346 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 FOCADQ5VW36 1801 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SHANK1Q9Y566 2161 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ELOA3DA6NLF2 546 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PBLDP30039 288 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CLCQ05315 142 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CPSF6Q16630 551 aaKnown RBP eCLIP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ELOA3BQ3SY89 546 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 AMZ2Q86W34 360 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ELOA3Q8NG57 546 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RIPOR3Q96MK2 946 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 NUDT9Q9BW91 350 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PIF1Q9H611 641 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 GJB4Q9NTQ9 266 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CNTN3Q9P232 1028 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SPATA31A5Q5VU36 1347 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SPATA31A7Q8IWB4 1347 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 A8MXE2 369 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CXCR6O00574 342 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 IFNA5P01569 189 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 AGXTP21549 392 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PFKPQ01813 784 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 GALNT1Q10472 559 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CCNJQ5T5M9 372 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 GLT8D1Q68CQ7 371 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 NIPAL3Q6P499 406 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RABEPKQ7Z6M1 372 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CMKLR1Q99788 373 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SLC7A11Q9UPY5 501 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 USP54Q70EL1 1684 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 FAM230AA0A1W2PPH8 454 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SCN2BO60939 215 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 C1RP00736 705 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SDHBP21912 280 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PDHA2P29803 388 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DCDC1P59894 354 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 C1QTNF8P60827 252 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 VLDLRP98155 873 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TARDBPQ13148 414 aaKnown RBP eCLIP5.92□□□□□ -1.461e-9■■■□□ 17
VPS13D-201ENST00000011700 TUSC3Q13454 348 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DSC3Q14574 896 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MIIPQ5JXC2 388 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CES3Q6UWW8 571 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SLC24A5Q71RS6 500 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms