RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Nme4Q9WV84 186 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Col4a1P02463 1669 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r22E9Q7S8 853 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r35E9Q7U8 861 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hps1O08983 704 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lire1P11260 357 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Upp1P52624 311 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ezh1P70351 747 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fbp2P70695 339 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ugt2a2Q6PDD0 528 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 2700097O09RikQ6PGK3 301 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kcnk10Q8BUW1 535 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Crispld1Q8CGD2 500 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Mnd1Q8K396 205 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Angptl7Q8R1Q3 337 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Retreg1dQ8VE91 480 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cbr4Q91VT4 236 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Eif2b2Q99LD9 351 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Trim8Q99PJ2 551 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Q9CWU4 180 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pbdc1Q9D0B6 198 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Wdr61Q9ERF3 305 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Stk19Q9JHN8 254 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tsc22d3Q9Z2S7 137 aa10.03□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc43a3A2AVZ9 502 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Btnl6A2CG22 539 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tcte1A6H639 498 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Esp22A8R0V4 111 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r114E9Q281 856 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Csnk2a2O54833 350 aaKnown RBP10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Syngr1O55100 234 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fbxo40P62932 710 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hoxd13P70217 339 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Snx21Q3UR97 363 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zc3h12aQ5D1E7 596 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nr0b2Q62227 260 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zc3h11aQ6NZF1 792 aaKnown RBP10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Paqr3Q6TCG8 311 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pcdh8Q7TSK3 1070 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Efcab3Q80X60 432 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Chrnb3Q8BMN3 464 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Csnk1g1Q8BTH8 459 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cacnb2Q8CC27 655 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ugt2b34Q8K154 532 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Trib2Q8K4K3 343 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Slc9a8Q8R4D1 576 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Klrb1fQ8VD98 217 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rprd1bQ9CSU0 326 aaKnown RBP10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Q9D4W2 315 aa10.02□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ccdc88cQ6VGS5 2009 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm4924A0A1B0GR71 966 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc9a6A1L3P4 702 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rab8aP55258 207 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rnf44Q3UHJ8 407 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tas2r106Q7M724 308 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ttc29Q80VM3 471 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q8C0X8 640 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Phtf2Q8CB19 747 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pus10Q9D3U0 527 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr701Q9D3U9 316 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Noa1Q9JJG9 693 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 TomtA1Y9I9 258 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1040A2ARY1 313 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rdh8D3Z6W3 317 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r18E9Q280 788 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Csf2P01587 141 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Apoa2P09813 102 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 DctP29812 517 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cfl2P45591 166 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr616Q3KPB0 317 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Taar7dQ5QD10 358 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cdk6Q64261 326 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cntn4Q69Z26 1026 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sec22cQ8BXT9 303 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ston2Q8BZ60 895 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc36a1Q8K4D3 475 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr382Q8VF79 312 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nudt7Q99P30 236 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ehd1Q9WVK4 534 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GghQ9Z0L8 317 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Atxn2O70305 1285 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cd160O88875 185 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hnf1bP27889 558 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 CcnfP51944 777 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Taf13P61216 124 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 UrodP70697 367 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Igfbp5Q07079 271 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr463Q5SW49 311 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr462Q5SW50 311 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hist2h2abQ64522 130 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rps27lQ6ZWY3 84 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Psmd11Q8BG32 422 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pced1bQ8BGX1 433 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q8C5S3 137 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gprc6aQ8K4Z6 928 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Timd2Q8R183 305 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tmem203Q8R235 136 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tspan33Q8R3S2 283 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ptgr2Q8VDQ1 351 aa10.02□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr801Q8VEU1 318 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms