RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 H2-M11F6U8V3 335 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm5849J3QPE5 117 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Lgals7O54974 136 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 CatP24270 527 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 CntfP51642 198 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Kcnab2P62482 367 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ap2m1P84091 435 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 DhpsQ3TXU5 369 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Xrra1Q3U3V8 786 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 BC080695Q66JY9 481 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Snx6Q6P8X1 406 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 MogsQ80UM7 834 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Sema3dQ8BH34 777 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pp2d1Q8BVT6 620 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr1346Q8VGH6 313 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Laptm4bQ91XQ6 227 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pycr2Q922Q4 320 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Myh9Q8VDD5 1960 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Vmn2r115E9Q0E7 857 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Eno2P17183 434 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cxcr2P35343 359 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Kcnj9P48543 393 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rab8aP55258 207 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pim3P58750 326 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rab2bP59279 216 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 OstnP61364 130 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 BmxP97504 651 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 SobpQ0P5V2 864 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ankdd1bQ14DN9 521 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Coq8bQ566J8 533 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ripk1Q60855 656 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Paqr6Q6TCG5 343 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Kiaa0895Q7TQE7 519 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PdprQ7TSQ8 878 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ston2Q8BZ60 895 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Bloc1s5Q8R015 185 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Micu1Q8VCX5 477 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cdkal1Q91WE6 578 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 EedQ921E6 441 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Asf1aQ9CQE6 204 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Uqcrc2Q9DB77 453 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rab13Q9DD03 202 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Wfdc1Q9ESH5 211 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Orc5Q9WUV0 435 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Mbd2Q9Z2E1 414 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 MycsQ9Z304 431 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rbbp6P97868 1790 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm13276A0A087WR18 182 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Kcna10B2RQA1 511 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Izumo4D3Z690 227 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Msl3l2G3X992 371 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm3336J3QMQ6 198 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Vmn2r54K7N649 806 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PfklP12382 780 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Nfatc3P97305 1075 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tmem181aQ3U3W2 474 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Parp8Q3UD82 852 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm45902Q3UDN3 361 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Bbs1Q3V3N7 593 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Zbtb46Q8BID6 600 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Zfp595Q8BIN6 625 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Mpp7Q8BVD5 576 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cpne5Q8JZW4 593 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tmem203Q8R235 136 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr1484Q8VEU6 315 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr847Q8VFF4 312 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cryl1Q99KP3 319 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Dph2Q9CR25 489 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 NarfQ9CYQ7 462 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Oser1Q9D722 291 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Yae1d1Q9DAY6 216 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Sertad3Q9ERC3 197 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ccdc86Q9JJ89 426 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm13088A2AGW6 460 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Zfp808B8JJZ4 753 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8229K7N749 213 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 P01652 108 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 AldoaP05064 364 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PnmtP40935 295 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Polr3bP59470 1133 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rps24P62849 133 aaKnown RBP9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 TekQ02858 1122 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Slc25a51Q5HZI9 298 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 IspdQ5RJG7 447 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cdh12Q5RJH3 794 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 MarcoQ60754 518 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ssr4Q62186 172 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Dpp10Q6NXK7 797 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rasgrp3Q6NZH9 691 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tas2r106Q7M724 308 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Slitrk4Q810B8 837 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PpcdcQ8BZB2 204 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gpr61Q8C010 449 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 N4bp2l2Q8JZS6 575 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Efcab7Q8VDY4 628 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Klk6Q91Y82 253 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Dnase1l2Q9D1G0 278 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ccdc3Q9D6Y1 273 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PgcQ9D7R7 392 aa9.67□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Vps29Q9QZ88 182 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms