RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tacr2P30549 384 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gbx1P82976 418 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Pou1f1Q00286 291 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Mmp11Q02853 492 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gpat2Q14DK4 801 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Upf3aQ3ULJ3 422 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 A630001G21RikQ3UTB2 229 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 CilpQ66K08 1184 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Wfikkn2Q7TQN3 571 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Efr3aQ8BG67 819 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Ostm1Q8BGT0 338 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gjc2Q8BQU6 440 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Gpat3Q8C0N2 438 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 4931406P16RikQ8C5X1 1059 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc35b4Q8CIA5 331 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 CacybpQ9CXW3 229 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 Ptges3lQ9D9A7 131 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 FancgQ9EQR6 623 aa15.95■□□□□ 0.14
Shh-201ENSMUST00000002708 MgamB5THE2 1827 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Mrgpra2aA0A0R4J1Z0 331 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Pramef25A2ASI9 494 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc25a54B1AUS6 473 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Ifi213D3Z5G0 586 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr543E9PWI5 336 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm5724L7N264 670 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 DbtP53395 482 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Igfbp5Q07079 271 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Usp39Q3TIX9 564 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Pdcd4Q61823 469 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Tmem151bQ68FE7 561 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Svs1Q6WIZ7 820 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Trim17Q7TPM3 477 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 A730061H03RikQ8BGD2 154 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Ugt2b35Q8BJL9 529 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Bend7Q8BSV3 434 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 BpifcQ8C186 509 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Prmt5Q8CIG8 637 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Appl1Q8K3H0 707 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Akr1c20Q8VC77 323 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Chil4Q91Z98 402 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Yif1bQ9CX30 311 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Btbd35f21A0A140T8Q5 498 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Tbc1d25A1A5B6 742 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Vmn2r116E9Q6I0 856 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Btbd35f22J3QN64 498 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Samd12Q0VE29 161 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Ints6Q6PCM2 883 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Olig3Q6PFG8 273 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Pcdh8Q7TSK3 1070 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 GabrpQ8QZW7 440 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc38a4Q8R1S9 547 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Vmn1r215Q8R264 300 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Vmn1r81Q8R286 306 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc15a4Q91W98 574 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Tex13bQ99MW5 186 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 5530400C23RikQ9D3I0 173 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Rcan2Q9JHG2 197 aa15.94■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm13285B1AYI3 182 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm13275B1AYI8 182 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Ddx43D3Z6P9 646 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc16a8O35308 492 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 SqleP52019 572 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Fam47cQ14BE7 430 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr1313Q7TQW8 311 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 IfnzQ8BQT1 182 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Slc41a2Q8BYR8 573 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm13278Q8CD73 182 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Rnf8Q8VC56 488 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr1263Q8VG63 306 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Elp2Q91WG4 831 aaKnown RBP15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Klk6Q91Y82 253 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Dctn3Q9Z0Y1 186 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Rp1P56716 2095 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Ptpn6P29351 595 aaKnown RBP15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Kcnh6Q32ME0 950 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Foxr1Q3UTB7 268 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Myo1dQ5SYD0 1006 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Fam169aQ5XG69 665 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 NapepldQ8BH82 396 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 TxlngQ8BHN1 524 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Shc2Q8BMC3 573 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Utp4Q8R2N2 686 aaKnown RBP15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Aim2Q91VJ1 354 aaKnown RBP15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Dppa5aQ9CQS7 118 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Armc8Q9DBR3 673 aa15.93■□□□□ 0.14
Shh-201ENSMUST00000002708 Igkv5-39A0A0G2JDV4 115 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Gm16494E9Q2Z4 87 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 MlxO08609 298 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Cyp1a1P00184 524 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Cd19P25918 547 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Acvr2aP27038 513 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Rps3aP97351 264 aaKnown RBP15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Q3UY34 256 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Tmem247Q497K7 211 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Fam189a1Q6A044 515 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Fam149b1Q6NSV7 578 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Colgalt2Q6NVG7 625 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr1197Q7TR13 314 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr1196Q7TR14 314 aa15.92■□□□□ 0.14
Shh-201ENSMUST00000002708 Angptl7Q8R1Q3 337 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms