RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 AAK1Q2M2I8 961 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SYTL3Q4VX76 610 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 C6orf136Q5SQH8 315 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CHST15Q7LFX5 561 aaPredicted RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 GOT1L1Q8NHS2 421 aaPredicted RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 ASZ1Q8WWH4 475 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 PMEPA1Q969W9 287 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 VPS33AQ96AX1 596 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 TIFAQ96CG3 184 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 AIFM2Q9BRQ8 373 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SLC25A23Q9BV35 468 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SLC12A9Q9BXP2 914 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 TRIM8Q9BZR9 551 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 RIC8BQ9NVN3 520 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 THAP10Q9P2Z0 257 aaPredicted RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 POU2F3Q9UKI9 436 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CNOT6Q9ULM6 557 aaKnown RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 PCDHGA7Q9Y5G6 932 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 LRRK1Q38SD2 2015 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 H0YJX3 145 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 NUAK1O60285 661 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 CNOT3O75175 753 aaKnown RBP11.16□□□□□ -0.62
CLN6-217ENST00000636964 KRT75O95678 551 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 CRYZL1O95825 349 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 SOD1P00441 154 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 FTH1P02794 183 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 CAPN3P20807 821 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 TIE1P35590 1138 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 HSD17B2P37059 387 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 HMGCS1Q01581 520 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 NR6A1Q15406 480 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 MAPRE2Q15555 327 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 MOGQ16653 247 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 NDUFA5Q16718 116 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 PTCHD3Q3KNS1 767 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 CCSMST1Q4G0I0 132 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 LDLRAP1Q5SW96 308 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 KRT80Q6KB66 452 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 ERN2Q76MJ5 926 aaKnown RBP11.16□□□□□ -0.62
CLN6-217ENST00000636964 TAMM41Q96BW9 452 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 SDCCAG3Q96C92 435 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 NUS1Q96E22 293 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 GDF15Q99988 308 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 TRMT61BQ9BVS5 477 aaKnown RBP11.16□□□□□ -0.62
CLN6-217ENST00000636964 TRIM54Q9BYV2 358 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 RDH14Q9HBH5 336 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 CLDND1Q9NY35 253 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 CRNNQ9UBG3 495 aaPredicted RBP11.16□□□□□ -0.62
CLN6-217ENST00000636964 PRKAB1Q9Y478 270 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 GPR45Q9Y5Y3 372 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 GMNNO75496 209 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 WDR47O94967 919 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 MATN1P21941 496 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 IDUAP35475 653 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 YBX1P67809 324 aaKnown RBP11.16□□□□□ -0.62
CLN6-217ENST00000636964 ITGADQ13349 1161 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 GBX1Q14549 363 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 ATP6AP1LQ52LC2 224 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 TMEM159Q96B96 161 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 PPP1R16AQ96I34 528 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 SERPINI1Q99574 410 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 SLC22A14Q9Y267 594 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 AP4S1Q9Y587 144 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 PCDHGA8Q9Y5G5 932 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 STON1Q9Y6Q2 735 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 PLXNA2O75051 1894 aa11.16□□□□□ -0.62
CLN6-217ENST00000636964 TRAV6A0A075B6T7 132 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 PRR23AA6NEV1 266 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 MID1O15344 667 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 EPORP19235 508 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CASP2P42575 452 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 IFITM3Q01628 133 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ELP6Q0PNE2 266 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CDONQ4KMG0 1287 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 TMEM184AQ6ZMB5 413 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 TRAPPC5Q8IUR0 188 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 EPHX4Q8IUS5 362 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 LMNTD1Q8N9Z9 388 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 PLA2G15Q8NCC3 412 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 CSF3RQ99062 836 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ACTR8Q9H981 624 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 NANOGQ9H9S0 305 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 SDR39U1Q9NRG7 319 aaPredicted RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 RAD18Q9NS91 495 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 GIN1Q9NXP7 522 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ST14Q9Y5Y6 855 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 DOCK9Q9BZ29 2069 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 A6NL46 340 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 ATG13O75143 517 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 VPS4BO75351 444 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 C8GP07360 202 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 PRR35P0CG20 571 aa11.15□□□□□ -0.62
CLN6-217ENST00000636964 TCEA1P23193 301 aaKnown RBP11.15□□□□□ -0.62
CLN6-217ENST00000636964 NFATC3Q12968 1075 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms