RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CD244Q9BZW8 370 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 B3GNT4Q9C0J1 378 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 LRRN3Q9H3W5 708 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF768Q9H5H4 540 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PELI2Q9HAT8 420 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 RXFP3Q9NSD7 469 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 DNAJC11Q9NVH1 559 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 OXSMQ9NWU1 459 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 ACTR10Q9NZ32 417 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CPSF2Q9P2I0 782 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 EMCNQ9ULC0 261 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF232Q9UNY5 417 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 BTRCQ9Y297 605 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 BTBD3Q9Y2F9 522 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 TSC22D4Q9Y3Q8 395 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 CFAP20Q9Y6A4 193 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
UPF3B-205ENST00000636792 ASXL3Q9C0F0 2248 aa6.48□□□□□ -1.37
UPF3B-205ENST00000636792 EP300Q09472 2414 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 MDC1Q14676 2089 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 A0A1W2PPV9 198 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OR2A25A4D2G3 310 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OR6C74A6NCV1 312 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM114B3SHH9 223 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 G3V2L1 256 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 UBXN8O00124 270 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 E2F3O00716 465 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 CLGNO14967 610 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 NPHS1O60500 1241 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 TRIM13O60858 407 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ZBTB11O95625 1053 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 GUCA1CO95843 209 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OTCP00480 354 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 SERPINE1P05121 402 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 RPLP0P05388 317 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 SBK3P0C264 359 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 EBLN1P0CF75 366 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 THRAP10827 490 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 EZRP15311 586 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 GRK3P35626 688 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 HNF4AP41235 474 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 SERPINB4P48594 390 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PRDX1Q06830 199 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 CDC16Q13042 620 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 LCP2Q13094 533 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PRKG2Q13237 762 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 TRIP6Q15654 476 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PTCHD3Q3KNS1 767 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ZC3H12BQ5HYM0 836 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PAGE2BQ5JRK9 111 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF678Q5SXM1 525 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 LIPJQ5W064 366 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ICE2Q659A1 982 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ATG16L1Q676U5 607 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 NIPAL1Q6NVV3 410 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 RBM44Q6ZP01 1051 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 FRMD7Q6ZUT3 714 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 MTERF4Q7Z6M4 381 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 THOC6Q86W42 341 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 GALNT15Q8N3T1 639 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PTGR2Q8N8N7 351 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 LINC01555Q8NAE3 123 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ABHD11Q8NFV4 315 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OR2L3Q8NG85 312 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OR2A1Q8NGT9 310 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OR8K5Q8NH50 307 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF483Q8TF39 744 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ARL8AQ96BM9 186 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 REPS1Q96D71 796 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 FAM122AQ96E09 287 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 LIN37Q96GY3 246 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 FAM111AQ96PZ2 611 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 CCT7Q99832 543 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 NTMT1Q9BV86 223 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 SSBP4Q9BWG4 385 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 SEMA6CQ9H3T2 930 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 NT5DC2Q9H857 520 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 EML4Q9HC35 981 aaKnown RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 KCNK9Q9NPC2 374 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM184CQ9NVA4 438 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 HRASLS2Q9NWW9 162 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 DLL3Q9NYJ7 618 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 OGFRQ9NZT2 677 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 AKAP7Q9P0M2 348 aaPredicted RBP6.47□□□□□ -1.37
UPF3B-205ENST00000636792 ADGRE2Q9UHX3 823 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PCTPQ9UKL6 214 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 IKZF3Q9UKT9 509 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 SNX7Q9UNH6 387 aa6.47□□□□□ -1.37
UPF3B-205ENST00000636792 PTPRBP23467 1997 aa6.46□□□□□ -1.37
UPF3B-205ENST00000636792 A0A1W2PQM1 296 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 CPED1A4D0V7 1026 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 GSAPA4D1B5 854 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 ISM1B1AKI9 464 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 BTN3A3O00478 584 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TXNDC9O14530 226 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 DLX3O60479 287 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 WDR47O94967 919 aa6.46□□□□□ -1.38
UPF3B-205ENST00000636792 TOP3BO95985 862 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms