RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RPA3P35244 121 aaPredicted RBP17.93■□□□□ 0.46
PNKP-224ENST00000631020 HSPA7P48741 367 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 ATP1A2P50993 1020 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 MAGOHP61326 146 aaKnown RBP17.93■□□□□ 0.46
PNKP-224ENST00000631020 C19orf57Q0VDD7 668 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 SF1Q15637 639 aaKnown RBP17.93■□□□□ 0.46
PNKP-224ENST00000631020 TTMPQ5BVD1 217 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 FAM129CQ86XR2 697 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 KLHDC8AQ8IYD2 350 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 SLC22A18Q96BI1 424 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 MIPEPQ99797 713 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 PITPNM3Q9BZ71 974 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 STMN4Q9H169 189 aaPredicted RBP17.93■□□□□ 0.46
PNKP-224ENST00000631020 SSU72Q9NP77 194 aaKnown RBP17.93■□□□□ 0.46
PNKP-224ENST00000631020 CCDC177Q9NQR7 707 aaPredicted RBP17.93■□□□□ 0.46
PNKP-224ENST00000631020 WWOXQ9NZC7 414 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 TAC3Q9UHF0 121 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 SH2B3Q9UQQ2 575 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 SLC22A14Q9Y267 594 aa17.93■□□□□ 0.46
PNKP-224ENST00000631020 SNRNP200O75643 2136 aaKnown RBP17.92■□□□□ 0.46
PNKP-224ENST00000631020 IGHV5-51A0A0C4DH38 117 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 C1QL1O75973 258 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 GFAPP14136 432 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 PVRP15151 417 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 ALDH18A1P54886 795 aaKnown RBP17.92■□□□□ 0.46
PNKP-224ENST00000631020 SETDB1Q15047 1291 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 SLC5A12Q1EHB4 618 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 CCDC153Q494R4 210 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 KIAA1614Q5VZ46 1190 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 CAPN13Q6MZZ7 669 aaPredicted RBP17.92■□□□□ 0.46
PNKP-224ENST00000631020 CEACAM20Q6UY09 585 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 TCAIMQ8N3R3 496 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 ZSCAN1Q8NBB4 408 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 OR2L3Q8NG85 312 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 NKD1Q969G9 470 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 PMEPA1Q969W9 287 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 PHF21BQ96EK2 531 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 ATP6V1G3Q96LB4 118 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 CD244Q9BZW8 370 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 KLHL25Q9H0H3 589 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 SEMA5BQ9P283 1151 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 KLHL20Q9Y2M5 609 aa17.92■□□□□ 0.46
PNKP-224ENST00000631020 TLCD2A6NGC4 264 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 A8MT66 165 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 SMIM24O75264 130 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 STK16O75716 305 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 SIX3O95343 332 aaPredicted RBP17.91■□□□□ 0.46
PNKP-224ENST00000631020 ITGB2P05107 769 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 PRDX1Q06830 199 aaKnown RBP17.91■□□□□ 0.46
PNKP-224ENST00000631020 THEMIS2Q5TEJ8 643 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 CACHD1Q5VU97 1274 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 PRSS42Q7Z5A4 293 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 THOC6Q86W42 341 aaKnown RBP17.91■□□□□ 0.46
PNKP-224ENST00000631020 PTGR2Q8N8N7 351 aaPredicted RBP17.91■□□□□ 0.46
PNKP-224ENST00000631020 ARMC2Q8NEN0 867 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 UBTD2Q8WUN7 234 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 FAM111AQ96PZ2 611 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 CD180Q99467 661 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 SPRY4Q9C004 299 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 C1GALT1Q9NS00 363 aa17.91■□□□□ 0.46
PNKP-224ENST00000631020 IGKV1-8A0A0C4DH67 115 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 SLC9B1P1A6NJY1 282 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 RASSF9O75901 435 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 WDR47O94967 919 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 ST6GAL1P15907 406 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 CDH3P22223 829 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 CCND1P24385 295 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 ZIC1Q15915 447 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 PRAMEF13Q5VWM6 474 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 ICE2Q659A1 982 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 LCTLQ6UWM7 567 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 ZYG11AQ6WRX3 759 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 KLHL6Q8WZ60 621 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 TRAPPC9Q96Q05 1148 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 IQCGQ9H095 443 aaKnown RBP17.9■□□□□ 0.46
PNKP-224ENST00000631020 SLC6A20Q9NP91 592 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 MED4Q9NPJ6 270 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 SIDT1Q9NXL6 827 aaKnown RBP17.9■□□□□ 0.46
PNKP-224ENST00000631020 PILRAQ9UKJ1 303 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 TMCO1Q9UM00 188 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 PCDHGA4Q9Y5G9 962 aa17.9■□□□□ 0.46
PNKP-224ENST00000631020 PIEZO2Q9H5I5 2752 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 A0A0J9YY10 115 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 PRPF4O43172 522 aaKnown RBP eCLIP17.89■□□□□ 0.456e-7■■■■□ 23.2
PNKP-224ENST00000631020 CCNT2O60583 730 aaKnown RBP17.89■□□□□ 0.45
PNKP-224ENST00000631020 IPO13O94829 963 aaKnown RBP17.89■□□□□ 0.45
PNKP-224ENST00000631020 CPA3P15088 417 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 TAC1P20366 129 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 ATP5F1P24539 256 aaPredicted RBP17.89■□□□□ 0.45
PNKP-224ENST00000631020 GRIA3P42263 894 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 ETV4P43268 484 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 NFKB2Q00653 900 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 PCBP2Q15366 365 aaKnown RBP eCLIP17.89■□□□□ 0.45
PNKP-224ENST00000631020 ZNF843Q8N446 348 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 MOCOSQ96EN8 888 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 PCBD2Q9H0N5 130 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 CNOT10Q9H9A5 744 aaKnown RBP17.89■□□□□ 0.45
PNKP-224ENST00000631020 KCNK9Q9NPC2 374 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 ACSS2Q9NR19 701 aa17.89■□□□□ 0.45
PNKP-224ENST00000631020 CUEDC1Q9NWM3 386 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms