RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SUSD1Q6UWL2 747 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 LAS2Q8IYD9 372 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 LRRC56Q8IYG6 542 aaPredicted RBP9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 MAML2Q8IZL2 1156 aaPredicted RBP9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 NAGSQ8N159 534 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 MIER2Q8N344 545 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 LMNTD1Q8N9Z9 388 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 FNDC5Q8NAU1 212 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 PPFIBP2Q8ND30 876 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 CCL4L1Q8NHW4 92 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 TSPEARQ8WU66 669 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 CMTM7Q96FZ5 175 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 CDK15Q96Q40 435 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 PRPF18Q99633 342 aaKnown RBP9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 LRTM1Q9HBL6 345 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 VPS29Q9UBQ0 182 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 GMEB2Q9UKD1 530 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 ICKQ9UPZ9 632 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 RUVBL1Q9Y265 456 aaKnown RBP9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 WBP11Q9Y2W2 641 aaKnown RBP9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 RNF11Q9Y3C5 154 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 TIMM22Q9Y584 194 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 SNX11Q9Y5W9 270 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 PCM1Q15154 2024 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 FANCMQ8IYD8 2048 aa9.78□□□□□ -0.84
FOXCUT-201ENST00000628509 ARHGAP10A1A4S6 786 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 OR6C74A6NCV1 312 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 BBIP1A8MTZ0 92 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 E9PBE3 544 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ZNF195O14628 629 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 FFAR3O14843 346 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 GPR42O15529 346 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 DUX1O43812 170 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 KLHL41O60662 606 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 SEC22BO75396 215 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 UBXN7O94888 489 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 EPN2O95208 641 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ZNF883P0CG24 379 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CDH1P12830 882 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 EPHA8P29322 1005 aaPredicted RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ARRB2P32121 409 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CCR10P46092 362 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ASMTP46597 345 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ACADVLP49748 655 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RAP1GDS1P52306 607 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CLNS1AP54105 237 aaKnown RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 STXBP1P61764 594 aaKnown RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 EMX2Q04743 252 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RGS1Q08116 209 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ACSM2AQ08AH3 577 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 LRRC74AQ0VAA2 488 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CUL3Q13618 768 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RBBP5Q15291 538 aaKnown RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 NR0B2Q15466 257 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 AP5B1Q2VPB7 878 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 SLC9B1Q4ZJI4 515 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 TMEM35AQ53FP2 167 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 TRIM61Q5EBN2 209 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 XKR7Q5GH72 579 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 MANEAQ5SRI9 462 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CES4AQ5XG92 561 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ACSM2BQ68CK6 577 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 XKR5Q6UX68 686 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 LARP4Q71RC2 724 aaKnown RBP eCLIP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RPS27LQ71UM5 84 aaKnown RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CLNKQ7Z7G1 428 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 PLXDC1Q8IUK5 500 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ARL14Q8N4G2 192 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 CPSF7Q8N684 471 aaKnown RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 GLB1L3Q8NCI6 653 aaPredicted RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 OR2L3Q8NG85 312 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 OR7G3Q8NG95 312 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RP9Q8TA86 221 aaKnown RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RERGQ96A58 199 aaPredicted RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 IL17FQ96PD4 163 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 EBF4Q9BQW3 602 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 RAB33BQ9H082 229 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 AKTIPQ9H8T0 292 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 HRASLS2Q9NWW9 162 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ASIC5Q9NY37 505 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 ACTR10Q9NZ32 417 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 SCHIP1Q9P0W5 487 aaPredicted RBP9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 PLAGL1Q9UM63 463 aa9.77□□□□□ -0.85
FOXCUT-201ENST00000628509 SPAG17Q6Q759 2223 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 CACNA1IQ9P0X4 2223 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 SZT2Q5T011 3432 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 TRBV23OR9-2A0A075B6M9 112 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 A0A0J9YY10 115 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 OR5K3A6NET4 321 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 TMEM233B4DJY2 109 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 PCDHGA12O60330 932 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 PRMT3O60678 531 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 PEX11AO75192 247 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 CLEC3AO75596 197 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 SEMA3DO95025 777 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 PROS1P07225 676 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 SLC35G6P0C7Q6 338 aa9.76□□□□□ -0.85
FOXCUT-201ENST00000628509 MPLP40238 635 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms