RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TRPC4Q9UBN4 977 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 NOCTQ9UK39 431 aaKnown RBP4.46□□□□□ -1.7
CPNE3-213ENST00000622183 IL16Q14005 1332 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 RPGRIP1LQ68CZ1 1315 aa4.46□□□□□ -1.7
CPNE3-213ENST00000622183 IGHV4-61A0A0C4DH41 118 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 SMIM30A4D0T7 59 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 KCNAB3O43448 404 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 CRCPO75575 148 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 SLC22A3O75751 556 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 KRT36O76013 467 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 OLFM2O95897 454 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 IGHV4-59P01825 116 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 CRYAAP02489 173 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 TGFB3P10600 412 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 VCLP18206 1134 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 CYP2A7P20853 494 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 CCKARP32238 428 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 NME5P56597 212 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 GCNT1Q02742 428 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 ARL16Q0P5N6 197 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 GPR17Q13304 367 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 RPS6KA1Q15418 735 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF770Q6IQ21 691 aaPredicted RBP4.45□□□□□ -1.7
CPNE3-213ENST00000622183 FUT10Q6P4F1 479 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 ALKBH5Q6P6C2 394 aaKnown RBP4.45□□□□□ -1.7
CPNE3-213ENST00000622183 CTR9Q6PD62 1173 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 C19orf48Q6RUI8 117 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 AQP12AQ8IXF9 295 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF843Q8N446 348 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 KLHDC1Q8N7A1 406 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 LPCAT1Q8NF37 534 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 OR13C3Q8NGS6 347 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 SNX21Q969T3 373 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 C4orf45Q96LM5 186 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 TSSK2Q96PF2 358 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 SHARPINQ9H0F6 387 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 UBQLN3Q9H347 655 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 RIMS4Q9H426 269 aaPredicted RBP4.45□□□□□ -1.7
CPNE3-213ENST00000622183 PNPLA3Q9NST1 481 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 SPG21Q9NZD8 308 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 MAN1B1Q9UKM7 699 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 STX8Q9UNK0 236 aa4.45□□□□□ -1.7
CPNE3-213ENST00000622183 A0A0A6YYC8 382 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 NPIPA3F8WFD2 350 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 I3L1I5 382 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 CCL24O00175 119 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ATP9AO75110 1047 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 AKAP3O75969 853 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 DFFBO76075 338 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 DDHD2O94830 711 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 GLCEO94923 617 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 MT-ND3P03897 115 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 SP9P0CG40 484 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 THEGLP0DJG4 465 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 F3P13726 295 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 CD59P13987 128 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 DARSP14868 501 aaKnown RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 STMN1P16949 149 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ALDH4A1P30038 563 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 CEACAM8P31997 349 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 CTNNB1P35222 781 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ATP6V1E1P36543 226 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 AKAP17AQ02040 695 aaKnown RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ZRSR1Q15695 479 aaKnown RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF672Q499Z4 452 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 GPR33Q49SQ1 333 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 AARDQ4LEZ3 155 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 XKR6Q5GH73 641 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 UGT3A1Q6NUS8 523 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 TTC27Q6P3X3 843 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 RBMS3Q6XE24 437 aaKnown RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 MARK2Q7KZI7 788 aaKnown RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 CCDC60Q8IWA6 550 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 KLHDC8AQ8IYD2 350 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ARL10Q8N8L6 244 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 KIAA0895Q8NCT3 520 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 PSMA8Q8TAA3 256 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 FCAMRQ8WWV6 532 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 TM9SF4Q92544 642 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ATP6V0A1Q93050 837 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 TMEM143Q96AN5 459 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 CDKN2AIPNLQ96HQ2 116 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 PANX3Q96QZ0 392 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 RAB9BQ9NP90 201 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 GPR173Q9NS66 373 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-213ENST00000622183 FBXW2Q9UKT8 454 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 ITM2BQ9Y287 266 aa4.44□□□□□ -1.7
CPNE3-213ENST00000622183 TRAV18A0A075B6X5 111 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 FAM172BPA6NC97 362 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 P2RY10O00398 339 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 FGF17O60258 216 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 GLRA3O75311 464 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 DLATP10515 647 aaKnown RBP4.43□□□□□ -1.7
CPNE3-213ENST00000622183 LHCGRP22888 699 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 ITGA3P26006 1051 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 SSTR1P30872 391 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 SERPINB6P35237 376 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 SFTPDP35247 375 aa4.43□□□□□ -1.7
CPNE3-213ENST00000622183 CETN2P41208 172 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms