RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CCL21O00585 134 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 DSCR3O14972 297 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 KLHL18O94889 574 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 AP2A1O95782 977 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 APOC2P02655 101 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PRSS56P0CW18 603 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 COX6B1P14854 86 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ACPPP15309 386 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 HIVEP1P15822 2718 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ACADLP28330 430 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 HTR1EP28566 365 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 GRIA3P42263 894 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 NSG1P42857 185 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 OR1D4P47884 311 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PLOD1Q02809 727 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 OCA2Q04671 838 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 CACNG1Q06432 222 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 Q0VFX4 171 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 MSLNQ13421 630 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 SPARCL1Q14515 664 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 GRM7Q14831 915 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 DBN1Q16643 649 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ZC3H12BQ5HYM0 836 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 TCTE1Q5JU00 501 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ANKRD20A2Q5SQ80 823 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ANKRD20A1Q5TYW2 823 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ANKRD20A3Q5VUR7 823 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 NAPRTQ6XQN6 538 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 BNC2Q6ZN30 1099 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 MED13LQ71F56 2210 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 NLRP9Q7RTR0 991 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 MRGPRGQ86SM5 289 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 EXOC3L1Q86VI1 746 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 RELL1Q8IUW5 271 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PIANPQ8IYJ0 282 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PRSS58Q8IYP2 241 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 RCOR2Q8IZ40 523 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 METTL27Q8N6F8 245 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 TTC29Q8NA56 475 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 EPS8L3Q8TE67 593 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 NR4A3Q92570 626 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 SLC22A18Q96BI1 424 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 CCDC120Q96HB5 630 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 LURAP1Q96LR2 239 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PPP1R2P1Q96PQ5 205 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 HEMGNQ9BXL5 484 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ZNF160Q9HCG1 818 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 INTS7Q9NVH2 962 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 IL1RAPL1Q9NZN1 696 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 SH3BGRL2Q9UJC5 107 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 R3HDM2Q9Y2K5 976 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 TRAV17A0A0B4J275 112 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 H7C0S8 307 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PCDH17O14917 1159 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 RGS16O15492 202 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 KCNN4O15554 427 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 USP1O94782 785 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 UNC5CO95185 931 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 HPP00738 406 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 TPBGLP0DKB5 382 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 PEBP1P30086 187 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 RAB28P51157 221 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 CSE1LP55060 971 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 KLC1Q07866 573 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 SF1Q15637 639 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 INAQ16352 499 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 FAM214AQ32MH5 1076 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 YOD1Q5VVQ6 348 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 ZNF324BQ6AW86 544 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 MTFR2Q6P444 385 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 BBS12Q6ZW61 710 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 COX15Q7KZN9 410 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 TAX1BP1Q86VP1 789 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 CDKL3Q8IVW4 592 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 KATNAL2Q8IYT4 538 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ZNF808Q8N4W9 903 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 C2orf73Q8N5S3 287 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 ACTL9Q8TC94 416 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 C1orf54Q8WWF1 131 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 C8orf44Q96CB5 159 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 TAAR6Q96RI8 345 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 SELENOSQ9BQE4 189 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 TRIM56Q9BRZ2 755 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLK1-215ENST00000621181 CDC42EP4Q9H3Q1 356 aaKnown RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 PTGFRNQ9P2B2 879 aa7.48□□□□□ -1.21
CLK1-215ENST00000621181 ZNF282Q9UDV7 671 aaPredicted RBP7.48□□□□□ -1.21
CLK1-215ENST00000621181 ITPR3Q14573 2671 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 NSG1A0A0A6YYJ2 146 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 CCT8L1PA6NM43 557 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 RASGRF2O14827 1237 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 DNAJC8O75937 253 aaPredicted RBP7.47□□□□□ -1.21
CLK1-215ENST00000621181 TTC4O95801 387 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 ONECUT2O95948 504 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 S1PR4O95977 384 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 F10P00742 488 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 RPN2P04844 631 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
CLK1-215ENST00000621181 RBP3P10745 1247 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms