RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 CELSR3Q9NYQ7 3312 aa3.5□□□□□ -1.85
CBWD1-229ENST00000620292 PLXNB3Q9ULL4 1909 aa3.5□□□□□ -1.85
CBWD1-229ENST00000620292 MYO16Q9Y6X6 1858 aa3.5□□□□□ -1.85
CBWD1-229ENST00000620292 FREM2Q5SZK8 3169 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 FRMPD4Q14CM0 1322 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 LAMA5O15230 3695 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 C5orf60A6NFR6 353 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 MYO1GB0I1T2 1018 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 B4DLN1 442 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 EIF3DO15371 548 aaKnown RBP eCLIP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 IPO8O15397 1037 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 OGG1O15527 345 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 GRID2O43424 1007 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 PLPP2O43688 288 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SH3BP5O60239 455 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 TMCC2O75069 709 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 WISP2O76076 250 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 PDE9AO76083 593 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 CXCL14O95715 111 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 PLGP00747 810 aaPredicted RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 ATP1A1P05023 1023 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 HSPD1P10809 573 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 TDGF1P13385 188 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 CCND2P30279 289 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 TIMP3P35625 211 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 TCF7P36402 384 aaPredicted RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 MRPL12P52815 198 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 CTSCP53634 463 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 NTHL1P78549 312 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 PHEXP78562 749 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 AIMP2Q13155 320 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 HTR4Q13639 388 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SMC1AQ14683 1233 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SF3A2Q15428 464 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 LETM2Q2VYF4 491 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 GFI1BQ5VTD9 330 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 FAM171BQ6P995 826 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 TMEM154Q6P9G4 183 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 DCLRE1AQ6PJP8 1040 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 TPRG1Q6ZUI0 275 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 STOX1Q6ZVD7 989 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 KCTD8Q6ZWB6 473 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 EPHX4Q8IUS5 362 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 RASGEF1CQ8N431 466 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 EMC1Q8N766 993 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SLC24A4Q8NFF2 622 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 DMBX1Q8NFW5 382 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 UTP15Q8TED0 518 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 PHF21AQ96BD5 680 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SKA1Q96BD8 255 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 ELMOD3Q96FG2 381 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 CCDC34Q96HJ3 373 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 ZNF558Q96NG5 402 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 GFI1Q99684 422 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 BARD1Q99728 777 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 ZHX3Q9H4I2 956 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 KAT14Q9H8E8 782 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 RGS18Q9NS28 235 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SEPT11Q9NVA2 429 aaKnown RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 C2orf42Q9NWW7 574 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SPG21Q9NZD8 308 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 KLHL9Q9P2J3 617 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 ZNF215Q9UL58 517 aaPredicted RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 FAF1Q9UNN5 650 aaPredicted RBP3.49□□□□□ -1.85
CBWD1-229ENST00000620292 B3GALT5Q9Y2C3 310 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 SESN1Q9Y6P5 492 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 PTPN13Q12923 2485 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 THADAQ6YHU6 1953 aa3.49□□□□□ -1.85
CBWD1-229ENST00000620292 GOLGA4Q13439 2230 aaKnown RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 CLUHO75153 1309 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 CFAP46Q8IYW2 2715 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 A0A0D9SFI3 127 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 TMEM8BA6NDV4 472 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 ANHXE9PGG2 379 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 FAM72CH0Y354 149 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 AP3D1O14617 1153 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 PRKNO60260 465 aaPredicted RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 PTP4A3O75365 173 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 VTNP04004 478 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 SRPRAP08240 638 aaKnown RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GABRB1P18505 474 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 ANXA7P20073 488 aaKnown RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 HRH2P25021 359 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GLIPR1P48060 266 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 CLCN4P51793 760 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 MLLT10P55197 1068 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GAGE2BQ13066 116 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 PTPN14Q15678 1187 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GAGE2EQ4V326 116 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 SIRPB2Q5JXA9 342 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 FAM72AQ5TYM5 149 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 FAM72DQ6L9T8 149 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GAGE2AQ6NT46 116 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GSG1LQ6UXU4 331 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 GET4Q7L5D6 327 aaPredicted RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 TRMT1LQ7Z2T5 733 aaKnown RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 ZNF589Q86UQ0 364 aaPredicted RBP3.48□□□□□ -1.85
CBWD1-229ENST00000620292 FAM72BQ86X60 149 aa3.48□□□□□ -1.85
CBWD1-229ENST00000620292 ECHDC2Q86YB7 292 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms