RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 WDR92Q96MX6 357 aa12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 TSSK3Q96PN8 268 aa12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 GPR174Q9BXC1 333 aa12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 XKR8Q9H6D3 395 aa12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 GID8Q9NWU2 228 aa12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 TAC3Q9UHF0 121 aa12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 LEF1Q9UJU2 399 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRSS51A0A1B0GVH4 220 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 KRBA1A5PL33 1030 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZNF839A8K0R7 811 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 C1GALT1C1LP0DN25 315 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 CDH1P12830 882 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 JAK1P23458 1154 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 AK4P27144 223 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 PSMB5P28074 263 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 HSD17B2P37059 387 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 GRIA3P42263 894 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 CCR5P51681 352 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 YPEL5P62699 121 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 KLC1Q07866 573 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 CSTF3Q12996 717 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 BLMHQ13867 455 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 TLR1Q15399 786 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 SF1Q15637 639 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 USP39Q53GS9 565 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 FAM160A2Q8N612 972 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 TSPEARQ8WU66 669 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 SNX19Q92543 992 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 LRGUKQ96M69 825 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 GEMIN8Q9NWZ8 242 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 VPS29Q9UBQ0 182 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 HS3ST3A1Q9Y663 406 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRAMEF33A0A0G2JMD5 474 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 SERTM1A2A2V5 107 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 PIPSLA2A3N6 862 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 CASQ2O14958 399 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZNF217O75362 1048 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 EEDO75530 441 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 RASGRP1O95267 797 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 APBB3O95704 486 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 IGHV4-34P06331 123 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 AMD1P17707 334 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 TACR1P25103 407 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 PXNP49023 591 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 ARHGAP19Q14CB8 494 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 FAM174BQ3ZCQ3 159 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 OGFRL1Q5TC84 451 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 ATG9BQ674R7 924 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 ISLR2Q6UXK2 745 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 Q6ZSR6 202 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 KIAA2013Q8IYS2 634 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 RAB42Q8N4Z0 105 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 MINDY1Q8N5J2 469 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 CDC26Q8NHZ8 85 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 LRTOMTQ8WZ04 291 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 GFM2Q969S9 779 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 EFCAB11Q9BUY7 163 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 SPNS1Q9H2V7 528 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRDM6Q9NQX0 595 aa12.25□□□□□ -0.45
TNFAIP3-209ENST00000619035 TNFRSF10CO14798 259 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 LRATO95237 230 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 ETHE1O95571 254 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 NCK1P16333 377 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 SDC1P18827 310 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 MAPK1P28482 360 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 RPS13P62277 151 aaKnown RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 CTBSQ01459 385 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 HIST2H2ACQ16777 129 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 UAP1L1Q3KQV9 507 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 COQ5Q5HYK3 327 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 PAGE2BQ5JRK9 111 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 HIST2H2AA3Q6FI13 130 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 NOXRED1Q6NXP6 359 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZFP1Q6P2D0 407 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 TMEM154Q6P9G4 183 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 SLC30A9Q6PML9 568 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 NXPE4Q6UWF7 544 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 LCTLQ6UWM7 567 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 C17orf64Q86WR6 236 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 SPPL2CQ8IUH8 684 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 PHACTR4Q8IZ21 702 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 SIX5Q8N196 739 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZNF740Q8NDX6 193 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 GPR156Q8NFN8 814 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 OR13H1Q8NG92 308 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 FAM174AQ8TBP5 190 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 TMEM125Q96AQ2 219 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 BIRC7Q96CA5 298 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 REPS1Q96D71 796 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 CAMK1GQ96NX5 476 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 HOPXQ9BPY8 73 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 HAUS8Q9BT25 410 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 TMEM168Q9H0V1 697 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 CAAP1Q9H8G2 361 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 LTB4R2Q9NPC1 389 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 SPATA6Q9NWH7 488 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 ASIC5Q9NY37 505 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms