RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 ZNF839A8K0R7 811 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 LRATO95237 230 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 KCNH1O95259 989 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 CHRNB1P11230 501 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 PSMB5P28074 263 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 AKT2P31751 481 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 HSD17B2P37059 387 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 DGKEP52429 567 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 LAPTM5Q13571 262 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 PWP1Q13610 501 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 TCEA2Q15560 299 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 MAPKAPK3Q16644 382 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 HIST2H2ACQ16777 129 aaPredicted RBP9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 HIST2H2AA3Q6FI13 130 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 ANO7Q6IWH7 933 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 NANOGP8Q6NSW7 305 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 CYP2R1Q6VVX0 501 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 ARPINQ7Z6K5 226 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 SYT12Q8IV01 421 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 LAS2Q8IYD9 372 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 C1orf52Q8N6N3 182 aaKnown RBP9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 GPR156Q8NFN8 814 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 SMPDL3AQ92484 453 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 GFM2Q969S9 779 aaKnown RBP9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 SH3KBP1Q96B97 665 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 EGLN2Q96KS0 407 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 PPM1MQ96MI6 270 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 TMEM74Q96NL1 305 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 OR52E6Q96RD3 313 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 C6orf106Q9H6K1 298 aaPredicted RBP9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 NANOGQ9H9S0 305 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 C2orf42Q9NWW7 574 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 PPT2Q9UMR5 302 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 DUSP12Q9UNI6 340 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 CYP8B1Q9UNU6 501 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 RUVBL1Q9Y265 456 aaKnown RBP9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 HEATR5BQ9P2D3 2071 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 FANCMQ8IYD8 2048 aa9.65□□□□□ -0.86
AL353770.3-201ENST00000616253 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 MYO1DO94832 1006 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 STAMBPO95630 424 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 ATP6V1B2P21281 511 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 HTR1BP28222 390 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 S100A3P33764 101 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 GSK3BP49841 420 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 LIPEQ05469 1076 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 KRT33BQ14525 404 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 MUM1Q2TAK8 710 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 UAP1L1Q3KQV9 507 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 LEXMQ3ZCV2 418 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 C10orf62Q5T681 223 aaPredicted RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 ZFP1Q6P2D0 407 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PRR23BQ6ZRT6 265 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 C17orf64Q86WR6 236 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 DHFR2Q86XF0 187 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 HID1Q8IV36 788 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 RIMKLAQ8IXN7 391 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 RAB42Q8N4Z0 105 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 LINC01555Q8NAE3 123 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 ZNF740Q8NDX6 193 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 CDC26Q8NHZ8 85 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 GTF2H4Q92759 462 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 CAMK1GQ96NX5 476 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 CGREF1Q99674 301 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 KCTD14Q9BQ13 255 aaPredicted RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 ALG2Q9H553 416 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 XKR8Q9H6D3 395 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 DMRT3Q9NQL9 472 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 NEUROG3Q9Y4Z2 214 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PLXND1Q9Y4D7 1925 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 A0A1W2PPV9 198 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 FOXE1O00358 373 aaPredicted RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 AKAP10O43572 662 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 APBB3O95704 486 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 IGLV3-19P01714 112 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 C8BP07358 591 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 IL9P15248 144 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PCSK2P16519 638 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PKLRP30613 574 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 RAB28P51157 221 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 EEFSECP57772 596 aaKnown RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 MTPNP58546 118 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PHC1P78364 1004 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 RAE1P78406 368 aaKnown RBP9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PHEXP78562 749 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 BNIP2Q12982 314 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 SELPLGQ14242 412 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 RPE65Q16518 533 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 PGS1Q32NB8 556 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 SPATS1Q496A3 300 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 SPIN4Q56A73 249 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 SYT13Q7L8C5 426 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 RD3Q7Z3Z2 195 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 IFNEQ86WN2 208 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 FAM129CQ86XR2 697 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
AL353770.3-201ENST00000616253 KRT78Q8N1N4 520 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms