RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PTGR1Q14914 329 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 ADNP2Q6IQ32 1131 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 TMIGD1Q6UXZ0 262 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 SLC36A4Q6YBV0 504 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 NET1Q7Z628 596 aaPredicted RBP20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PARGQ86W56 976 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 FCRL1Q96LA6 429 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 APOLD1Q96LR9 279 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 ZBTB18Q99592 522 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 DPY30Q9C005 99 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 SPNS1Q9H2V7 528 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 TCEAL2Q9H3H9 227 aaPredicted RBP20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PRM3Q9NNZ6 103 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 BAIAP2L1Q9UHR4 511 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 DLGAP4Q9Y2H0 992 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PCDHB11Q9Y5F2 797 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PCDHGA7Q9Y5G6 932 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 ATP6V1G2O95670 118 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PSMB5P28074 263 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 SLC19A1P41440 591 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PIK3CBP42338 1070 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 CCR8P51685 355 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PSME3P61289 254 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 RPS13P62277 151 aaKnown RBP20.78■□□□□ 0.92
USP6NL-204ENST00000606752 YBX1P67809 324 aaKnown RBP20.78■□□□□ 0.92
USP6NL-204ENST00000606752 PRDX1Q06830 199 aaKnown RBP20.78■□□□□ 0.92
USP6NL-204ENST00000606752 ZNF542PQ5EBM4 170 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 C6orf163Q5TEZ5 329 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 NOXRED1Q6NXP6 359 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 IYDQ6PHW0 289 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 MAMSTRQ6ZN01 415 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 GLB1L3Q8NCI6 653 aaPredicted RBP20.78■□□□□ 0.92
USP6NL-204ENST00000606752 ZNF740Q8NDX6 193 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 OR2A1Q8NGT9 310 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 WDR60Q8WVS4 1066 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 VPS33AQ96AX1 596 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 AIF1LQ9BQI0 150 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 RASSF4Q9H2L5 321 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 NMRK1Q9NWW6 199 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 CROTQ9UKG9 612 aa20.78■□□□□ 0.92
USP6NL-204ENST00000606752 COL6A3P12111 3177 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 CD38P28907 300 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 SHMT2P34897 504 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 KPNB1Q14974 876 aaKnown RBP20.77■□□□□ 0.92
USP6NL-204ENST00000606752 ICE2Q659A1 982 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 LAYNQ6UX15 382 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 IQCHQ86VS3 1027 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 OR4K1Q8NGD4 311 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 CD320Q9NPF0 282 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 CUEDC1Q9NWM3 386 aaPredicted RBP20.77■□□□□ 0.92
USP6NL-204ENST00000606752 GID8Q9NWU2 228 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 OR6C2Q9NZP2 312 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 TAAR2Q9P1P5 351 aa20.77■□□□□ 0.92
USP6NL-204ENST00000606752 LEF1Q9UJU2 399 aaPredicted RBP20.77■□□□□ 0.92
USP6NL-204ENST00000606752 PCM1Q15154 2024 aa20.77■□□□□ 0.91
USP6NL-204ENST00000606752 TRBV23OR9-2A0A075B6M9 112 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 A0A1W2PR77 199 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PRICKLE3O43900 615 aaPredicted RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 EEDO75530 441 aaKnown RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PDE5AO76074 875 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ETHE1O95571 254 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 CTSEP14091 401 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 DPP6P42658 865 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 CLDN8P56748 225 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 RACK1P63244 317 aaKnown RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PHEXP78562 749 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ZXDAP98168 799 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ACSM2AQ08AH3 577 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 TLR1Q15399 786 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 TRMT5Q32P41 509 aaKnown RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ACSM2BQ68CK6 577 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 C8orf82Q6P1X6 216 aaPredicted RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 AMIGO1Q86WK6 493 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 HPS6Q86YV9 775 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 EFCAB3Q8N7B9 438 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 LCN9Q8WX39 176 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 C11orf24Q96F05 449 aaPredicted RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PITHD1Q9GZP4 211 aaPredicted RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 CAAP1Q9H8G2 361 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 DMRT3Q9NQL9 472 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ADGRE2Q9UHX3 823 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 RUVBL1Q9Y265 456 aaKnown RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 GON4LQ3T8J9 2241 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ASPDHA6ND91 283 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 H7BY64 318 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 MAP3K13O43283 966 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 WNT1P04628 370 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 SDC1P18827 310 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 MAOBP27338 520 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 TIGD2Q4W5G0 525 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PIGGQ5H8A4 983 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 C1orf146Q5VVC0 180 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 CHTF18Q8WVB6 975 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PRAP1Q96NZ9 151 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 HOPXQ9BPY8 73 aaPredicted RBP20.76■□□□□ 0.91
USP6NL-204ENST00000606752 NT5DC2Q9H857 520 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 PPT2Q9UMR5 302 aa20.76■□□□□ 0.91
USP6NL-204ENST00000606752 ENTPD5O75356 428 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 MYO1DO94832 1006 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 ABATP80404 500 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms