RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 LMF2Q9BU23 707 aaKnown RBP4.32□□□□□ -1.72
SH3D19-213ENST00000604922 FNDC11Q9BVV2 318 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 ARRDC1-AS1Q9H2J1 176 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 MYOZ2Q9NPC6 264 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 RIPK3Q9Y572 518 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 LTBP2Q14767 1821 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 VPS13AQ96RL7 3174 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 TRANK1O15050 2925 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 ECM29Q5VYK3 1845 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 SERINC4A6NH21 518 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 RNASEH1O60930 286 aaKnown RBP4.31□□□□□ -1.72
SH3D19-213ENST00000604922 AVILO75366 819 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 SORBS2O94875 1100 aaKnown RBP4.31□□□□□ -1.72
SH3D19-213ENST00000604922 ZWINTO95229 277 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 CA4P22748 312 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 ACSL1P33121 698 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 MC1RQ01726 317 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 PIGZQ86VD9 579 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 TTC5Q8N0Z6 440 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 MARVELD2Q8N4S9 558 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 NIPA2Q8N8Q9 360 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 KBTBD8Q8NFY9 601 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 OR2AJ1Q8NGZ0 328 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 OR2T11Q8NH01 316 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 AGAP3Q96P47 875 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 IWS1Q96ST2 819 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 CHCHD6Q9BRQ6 235 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 BTBD10Q9BSF8 475 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 KIFC3Q9BVG8 833 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 LAT2Q9GZY6 243 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 DPAGT1Q9H3H5 408 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 A4GALTQ9NPC4 353 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 TMEM181Q9P2C4 612 aa4.31□□□□□ -1.72
SH3D19-213ENST00000604922 CHD6Q8TD26 2715 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 RIF1Q5UIP0 2472 aaKnown RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 UBN2Q6ZU65 1347 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 COL4A1P02462 1669 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 FAM186AA6NE01 2351 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 HEPACAM2A8MVW5 462 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 MED24O75448 989 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 CRLF1O75462 422 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 CAPN3P20807 821 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 SP100P23497 879 aaPredicted RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 PAX3P23760 479 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 HOXD10P28358 340 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 GABRA5P31644 462 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 SNX16P57768 344 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 DMPKQ09013 629 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 LPAL2Q16609 132 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 TCTE1Q5JU00 501 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 FIGLAQ6QHK4 219 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 AACSQ86V21 672 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 CFAP206Q8IYR0 622 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 FBXO39Q8N4B4 442 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 TRIML1Q8N9V2 468 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 DYRK2Q92630 601 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 FAM120BQ96EK7 910 aaKnown RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 DEFB118Q96PH6 123 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 VGLL1Q99990 258 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 TREX2Q9BQ50 279 aaPredicted RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 PYGO2Q9BRQ0 406 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 FGFBP2Q9BYJ0 223 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 MMP27Q9H306 513 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 ZCCHC17Q9NP64 241 aaKnown RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 SDR39U1Q9NRG7 319 aaPredicted RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 PAK5Q9P286 719 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 NME7Q9Y5B8 376 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 USP16Q9Y5T5 823 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 SMAD5-AS1Q9Y6J3 95 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 FASNP49327 2511 aaKnown RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 COL1A1P02452 1464 aaPredicted RBP4.3□□□□□ -1.72
SH3D19-213ENST00000604922 MAST2Q6P0Q8 1798 aa4.3□□□□□ -1.72
SH3D19-213ENST00000604922 DMXL1Q9Y485 3027 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 LOC100509620A0A075B734 347 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 A0A1W2PQ09 198 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 OR2A25A4D2G3 310 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 A6NCN8 305 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 ANKRD61A6NGH8 418 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 PAPSS1O43252 624 aaPredicted RBP4.29□□□□□ -1.72
SH3D19-213ENST00000604922 DOK2O60496 412 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 CREG1O75629 220 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 TSPAN9O75954 239 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 TRIM49P0CI25 452 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 TRIM49CP0CI26 452 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 SAT1P21673 171 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 GCH1P30793 250 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 MATR3P43243 847 aaKnown RBP eCLIP4.29□□□□□ -1.72
SH3D19-213ENST00000604922 RXRGP48443 463 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 CREB5Q02930 508 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 GRAPQ13588 217 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 DUSP28Q4G0W2 176 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 SUSD4Q5VX71 490 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 KRT79Q5XKE5 535 aa4.29□□□□□ -1.72
SH3D19-213ENST00000604922 APOBEC3FQ8IUX4 373 aaKnown RBP4.29□□□□□ -1.72
SH3D19-213ENST00000604922 C17orf53Q8N3J3 647 aaPredicted RBP4.29□□□□□ -1.72
SH3D19-213ENST00000604922 SPEM1Q8N4L4 309 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms