RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 SLC22A1O15245 554 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 LPXNO60711 386 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 B3GALT4O96024 378 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 C9P02748 559 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 GAAP10253 952 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 NID1P14543 1247 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 SYN1P17600 705 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 PIK3R1P27986 724 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 PCSK1P29120 753 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 RPL5P46777 297 aaKnown RBP6.96□□□□□ -1.3
TUBE1-207ENST00000604689 SCGB2A2Q13296 93 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 ACVR2BQ13705 512 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 GANABQ14697 944 aaKnown RBP6.96□□□□□ -1.3
TUBE1-207ENST00000604689 RAB30Q15771 203 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 ZFP69Q49AA0 526 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 SFT2D3Q587I9 215 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 GPR107Q5VW38 600 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 HACD4Q5VWC8 232 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 SEL1L3Q68CR1 1132 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 TMEM270Q6UE05 265 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 VN1R5Q7Z5H4 357 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 CLNKQ7Z7G1 428 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 FUNDC1Q8IVP5 155 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 TRAM1L1Q8N609 369 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 IL17RCQ8NAC3 791 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 C16orf78Q8WTQ4 265 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 DNAJB3Q8WWF6 145 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 YIPF5Q969M3 257 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 RFT1Q96AA3 541 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
TUBE1-207ENST00000604689 NKX2-4Q9H2Z4 354 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 ZMAT4Q9H898 229 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 SLC22A11Q9NSA0 550 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 C19orf12Q9NSK7 152 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 ING3Q9NXR8 418 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 TAS2R1Q9NYW7 299 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 CHRNA9Q9UGM1 479 aa6.96□□□□□ -1.3
TUBE1-207ENST00000604689 TRPC5Q9UL62 973 aaPredicted RBP6.96□□□□□ -1.3
TUBE1-207ENST00000604689 ARAP2Q8WZ64 1704 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ZNF839A8K0R7 811 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ERI2A8K979 691 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 TDP2O95551 362 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ATF2P15336 505 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CA4P22748 312 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 PTPN4P29074 926 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 EPHX2P34913 555 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ARL3P36405 182 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CEBPDP49716 269 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ACOT2P49753 483 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CLCNKAP51800 687 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 MAZP56270 477 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 SOX10P56693 466 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CABP4P57796 275 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 SP2Q02086 613 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ATP13A5Q4VNC0 1218 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 AFTPHQ6ULP2 937 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 LKAAEAR1Q8TD35 194 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ROBO4Q8WZ75 1007 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 FAM120BQ96EK7 910 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 NEDD4LQ96PU5 975 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 PDCD10Q9BUL8 212 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 GTPBP2Q9BX10 602 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CACNG6Q9BXT2 260 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 GPR62Q9BZJ7 368 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 PPA2Q9H2U2 334 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 COL20A1Q9P218 1284 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 MYEF2Q9P2K5 600 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 MARCOQ9UEW3 520 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CDC14AQ9UNH5 594 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CLCA2Q9UQC9 943 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 POLR3HQ9Y535 204 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 HS3ST4Q9Y661 456 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 MAU2Q9Y6X3 613 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 SCDO00767 359 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ARPC5O15511 151 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ZWINTO95229 277 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 PDGFBP01127 241 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 UGT2B4P06133 528 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ENO1P06733 434 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 LAG3P18627 525 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CPT2P23786 658 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ATP5C1P36542 298 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 GPLD1P80108 840 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 SLC9B1Q4ZJI4 515 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ESCO2Q56NI9 601 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 BSPRYQ5W0U4 402 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 TYW3Q6IPR3 259 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 MFSD7Q6UXD7 560 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 IL20RBQ6UXL0 311 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 ALYREFQ86V81 257 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 SLC13A5Q86YT5 568 aaPredicted RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 CPSF7Q8N684 471 aaKnown RBP6.95□□□□□ -1.3
TUBE1-207ENST00000604689 OR5M1Q8NGP8 315 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 OR10J5Q8NHC4 309 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 BPIFB1Q8TDL5 484 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 C10orf82Q8WW14 230 aa6.95□□□□□ -1.3
TUBE1-207ENST00000604689 PHYHIPQ92561 330 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms