RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 IGKV1-8A0A0C4DH67 115 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 LRRC14BA6NHZ5 514 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 TMX2-CTNND1H3BSU7 103 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 STX16-NPEPL1H3BU86 382 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 STX16O14662 325 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 HGSO14964 777 aaPredicted RBP18.11■□□□□ 0.49
CCDC9-205ENST00000600117 PRAMEF10O60809 474 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 SMIM24O75264 130 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 MAGP20916 626 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 ATP5F1P24539 256 aaPredicted RBP18.11■□□□□ 0.49
CCDC9-205ENST00000600117 CMPK1P30085 196 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 GRIA3P42263 894 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 ERVPABLB-1P60509 514 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 ABATP80404 500 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 NFKB2Q00653 900 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 PCBP2Q15366 365 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC9-205ENST00000600117 THEMIS2Q5TEJ8 643 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 ZYG11AQ6WRX3 759 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 KMT5CQ86Y97 462 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 TCP10LQ8TDR4 215 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 KCNE4Q8WWG9 221 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 GRAMD1AQ96CP6 724 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 PHF21BQ96EK2 531 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 DPH1Q9BZG8 443 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 CNOT10Q9H9A5 744 aaKnown RBP18.11■□□□□ 0.49
CCDC9-205ENST00000600117 CUEDC1Q9NWM3 386 aaPredicted RBP18.11■□□□□ 0.49
CCDC9-205ENST00000600117 BTRCQ9Y297 605 aa18.11■□□□□ 0.49
CCDC9-205ENST00000600117 A0A1W2PNU3 283 aaPredicted RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 KLK10O43240 276 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 WDR47O94967 919 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 CCNDBP1O95273 360 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 SIX3O95343 332 aaPredicted RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 ZBTB11O95625 1053 aaPredicted RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 TAC1P20366 129 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 SEPHS1P49903 392 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 MAGOHP61326 146 aaKnown RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 MPP2Q14168 576 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 TTMPQ5BVD1 217 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 FCRL6Q6DN72 434 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 ZNF425Q6IV72 752 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 LRRC70Q7Z2Q7 622 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 LURAP1LQ8IV03 231 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 C19orf47Q8N9M1 422 aaKnown RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 RDH11Q8TC12 318 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 FAM111AQ96PZ2 611 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 HAUS8Q9BT25 410 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 CHRNA10Q9GZZ6 450 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 IQCGQ9H095 443 aaKnown RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 MRPS30Q9NP92 439 aaKnown RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 DNAJC11Q9NVH1 559 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 SIDT1Q9NXL6 827 aaKnown RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 UNC79Q9P2D8 2635 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 USP9XQ93008 2570 aaPredicted RBP18.1■□□□□ 0.49
CCDC9-205ENST00000600117 HEATR5BQ9P2D3 2071 aa18.1■□□□□ 0.49
CCDC9-205ENST00000600117 OR2A25A4D2G3 310 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 K7EPI3 171 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 PRPF4O43172 522 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC9-205ENST00000600117 NRP2O60462 931 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 CCNT2O60583 730 aaKnown RBP18.09■□□□□ 0.49
CCDC9-205ENST00000600117 EPORP19235 508 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 EEF1DP29692 281 aaKnown RBP18.09■□□□□ 0.49
CCDC9-205ENST00000600117 ETV4P43268 484 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 GABREP78334 506 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 FIGLAQ6QHK4 219 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 PAQR7Q86WK9 346 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 C17orf64Q86WR6 236 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 D2HGDHQ8N465 521 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 ARMC2Q8NEN0 867 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 ATP6V1G3Q96LB4 118 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 DPH7Q9BTV6 452 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 C1QTNF3Q9BXJ4 246 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 STRADBQ9C0K7 418 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 FAM60AQ9NP50 221 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 SSUH2Q9Y2M2 353 aa18.09■□□□□ 0.49
CCDC9-205ENST00000600117 CCDC187A0A096LP49 1063 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PMS2P1A4D2B8 440 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 AGRPO00253 132 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PRAMEF4O60810 478 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 RPS17P08708 135 aaKnown RBP18.08■□□□□ 0.48
CCDC9-205ENST00000600117 MYL2P10916 166 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 CDH1P12830 882 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 CSTF2P33240 577 aaKnown RBP eCLIP18.08■□□□□ 0.48
CCDC9-205ENST00000600117 GABRA4P48169 554 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PRKAA2P54646 552 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 HSD11B2P80365 405 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 SRSF1Q07955 248 aaKnown RBP eCLIP18.08■□□□□ 0.483e-7■■□□□ 13.1
CCDC9-205ENST00000600117 CDC16Q13042 620 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PCLAFQ15004 111 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PRAMEF9Q5VWM5 478 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 METTL2BQ6P1Q9 378 aaKnown RBP18.08■□□□□ 0.48
CCDC9-205ENST00000600117 BMPERQ8N8U9 685 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 AGBL5Q8NDL9 886 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 ABHD11Q8NFV4 315 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 SLC5A11Q8WWX8 675 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 NEIL2Q969S2 332 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 ZUFSPQ96AP4 578 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PKNOX2Q96KN3 472 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 PLCD4Q9BRC7 762 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 POLR1BQ9H9Y6 1135 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms