RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 OR2L3Q8NG85 312 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 OR2A1Q8NGT9 310 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 MCOLN3Q8TDD5 553 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 MR1Q95460 341 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 ZUFSPQ96AP4 578 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 SLC45A3Q96JT2 553 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 MIPEPQ99797 713 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 ACAT2Q9BWD1 397 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 TGIF2Q9GZN2 237 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 RHOJQ9H4E5 214 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 ABCF3Q9NUQ8 709 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 IL17BQ9UHF5 180 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 KCND3Q9UK17 655 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 AP1M2Q9Y6Q5 423 aa9.96□□□□□ -0.82
SDF2-208ENST00000589788 FAM95CA0A1B0GW59 222 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 TCRBV9S1A1TA0A576 114 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 EIF4E1BA6NMX2 242 aaKnown RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 ADARB2-AS1A8MUL3 147 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 TARM1B6A8C7 271 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 C21orf140B9A014 251 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SLC16A5O15375 505 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ZSCAN9O15535 394 aaPredicted RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 ZNF749O43361 778 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 PRICKLE3O43900 615 aaPredicted RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 CCNDBP1O95273 360 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 HIST1H2AGP0C0S8 130 aaPredicted RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 FAM153BP0C7A2 387 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 PRKAR1AP10644 381 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ERGP11308 486 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 HIST1H2ADP20671 130 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 AGXTP21549 392 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ADH6P28332 368 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 STX2P32856 288 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ADH7P40394 386 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 GRIA3P42263 894 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SLC12A2P55011 1212 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 CYP4F2P78329 520 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 GPS2Q13227 327 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 DNASE1L3Q13609 305 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SLMAPQ14BN4 828 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SPRED3Q2MJR0 410 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 FAM153CQ494X1 144 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 PRAMEF17Q5VTA0 474 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 TLDC1Q6P9B6 456 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SUSD1Q6UWL2 747 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 MCATQ8IVS2 390 aaKnown RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 CTAGE3PQ8IX95 158 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 CT55Q8WUE5 264 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ZNF480Q8WV37 535 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 STARD8Q92502 1023 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 CAVIN3Q969G5 261 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 VPS39Q96JC1 886 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 HIST1H2AHQ96KK5 128 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 CCDC138Q96M89 665 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 LRFN5Q96NI6 719 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 OLFM1Q99784 485 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 HIST1H2AJQ99878 128 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SELENOSQ9BQE4 189 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 H2AFJQ9BTM1 129 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 SLC12A9Q9BXP2 914 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 TRIM54Q9BYV2 358 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 PARVBQ9HBI1 364 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 MRPS30Q9NP92 439 aaKnown RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 UTP6Q9NYH9 597 aaKnown RBP9.95□□□□□ -0.82
SDF2-208ENST00000589788 EURLQ9NYK6 297 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 TAC3Q9UHF0 121 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ADAMTS6Q9UKP5 1117 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 PCDHGB7Q9Y5F8 929 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 ANKRD12Q6UB98 2062 aa9.95□□□□□ -0.82
SDF2-208ENST00000589788 A0A1W2PPV9 198 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 CXorf49A8MYA2 514 aaPredicted RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 DYNC1I1O14576 645 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 HCRTR1O43613 425 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 PIAS1O75925 651 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 ITGB2P05107 769 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 F8A1P23610 371 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 GABRA4P48169 554 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 GPX6P59796 221 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 RPS15P62841 145 aaKnown RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 CDC20Q12834 499 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 FCRL6Q6DN72 434 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 FAM199XQ6PEV8 388 aaPredicted RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 CYS1Q717R9 158 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 DSELQ8IZU8 1212 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 NKAPQ8N5F7 415 aaKnown RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 ZNF655Q8N720 491 aaPredicted RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 SLC38A9Q8NBW4 561 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 TSPAN17Q96FV3 270 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 CATSPER2Q96P56 530 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 CPNE1Q99829 537 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 DPH2Q9BQC3 489 aaPredicted RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 DPH7Q9BTV6 452 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 NDC1Q9BTX1 674 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 GPR87Q9BY21 358 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 TXLNGYQ9BZA5 131 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 SPRTNQ9H040 489 aaPredicted RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 SMYD2Q9NRG4 433 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 TXLNGQ9NUQ3 528 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms