RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 C19orf47Q8N9M1 422 aaKnown RBP11.69□□□□□ -0.54
DNMT1-218ENST00000589294 AGBL5Q8NDL9 886 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 OR6Y1Q8NGX8 325 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 ATP6V1E2Q96A05 226 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 THAP11Q96EK4 314 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 PTCD3Q96EY7 689 aaKnown RBP11.69□□□□□ -0.54
DNMT1-218ENST00000589294 LIN37Q96GY3 246 aaPredicted RBP11.69□□□□□ -0.54
DNMT1-218ENST00000589294 CMKLR1Q99788 373 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 PAIP2Q9BPZ3 127 aaKnown RBP11.69□□□□□ -0.54
DNMT1-218ENST00000589294 EFCAB11Q9BUY7 163 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 SARGQ9BW04 601 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
DNMT1-218ENST00000589294 NT5DC2Q9H857 520 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 NOL11Q9H8H0 719 aaKnown RBP11.69□□□□□ -0.54
DNMT1-218ENST00000589294 SLC6A20Q9NP91 592 aa11.69□□□□□ -0.54
DNMT1-218ENST00000589294 KCNE1BA0A087WTH5 132 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 E7EQ34 232 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 OR7A17O14581 309 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 NPHS1O60500 1241 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 SRPX2O60687 465 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 SNUPNO95149 360 aaKnown RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CLDN9O95484 217 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 OTCP00480 354 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 EBLN1P0CF75 366 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 NEFHP12036 1026 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 PVRP15151 417 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 EZRP15311 586 aaKnown RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 NR1D1P20393 614 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 HNF4AP41235 474 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 ID4P47928 161 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 SEPHS1P49903 392 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CCNG1P51959 295 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CDH13P55290 713 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 PKNOX1P55347 436 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 GALNT1Q10472 559 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 LCP2Q13094 533 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CHIT1Q13231 466 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 EIF3IQ13347 325 aaKnown RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 DOC2AQ14183 400 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 ZIC1Q15915 447 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 HIST2H2ACQ16777 129 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 XKR6Q5GH73 641 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 PAGE2BQ5JRK9 111 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CATSPEREQ5SY80 951 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 HIST2H2AA3Q6FI13 130 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CYB5D1Q6P9G0 228 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 FRMD7Q6ZUT3 714 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 TMPRSS7Q7RTY8 843 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 MILR1Q7Z6M3 343 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 KRT78Q8N1N4 520 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 L3MBTL4Q8NA19 623 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 PPP1R14CQ8TAE6 165 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 RAB3IL1Q8TBN0 382 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 MDM1Q8TC05 714 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 UBE2E3Q969T4 207 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 AIF1LQ9BQI0 150 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 MECRQ9BV79 373 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 GSTO2Q9H4Y5 243 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 EML4Q9HC35 981 aaKnown RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 ZBTB26Q9HCK0 441 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 CUEDC1Q9NWM3 386 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-218ENST00000589294 SOHLH2Q9NX45 425 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 PILRAQ9UKJ1 303 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 SH2B3Q9UQQ2 575 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 KLHL20Q9Y2M5 609 aa11.68□□□□□ -0.54
DNMT1-218ENST00000589294 TRBC2A0A5B9 178 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 WDR91A4D1P6 747 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 B4E171 279 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 PRAMEF4O60810 478 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 SERPINE1P05121 402 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 FGF3P11487 239 aaPredicted RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 TSPAN7P41732 249 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 RPS15AP62244 130 aaKnown RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 ACY1Q03154 408 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 IL11RAQ14626 422 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 C16orf72Q14CZ0 275 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 PRAMEF9Q5VWM5 478 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 ADCK2Q7Z695 626 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 TMPRSS11BQ86T26 416 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 MCATQ8IVS2 390 aaKnown RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 RCBTB1Q8NDN9 531 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 OR8K5Q8NH50 307 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 MGARPQ8TDB4 240 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 TRPC4APQ8TEL6 797 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 NSUN5Q96P11 429 aaKnown RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 ZNF382Q96SR6 550 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 ZFYVE21Q9BQ24 234 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 DRC3Q9H069 523 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 KLHL25Q9H0H3 589 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 ACTR8Q9H981 624 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 FAM60AQ9NP50 221 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 MLXIPLQ9NP71 852 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 SEMA4BQ9NPR2 832 aaPredicted RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 FBXO8Q9NRD0 319 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 ENAMQ9NRM1 1142 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 INTS9Q9NV88 658 aaKnown RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 GEMIN8Q9NWZ8 242 aaKnown RBP11.67□□□□□ -0.54
DNMT1-218ENST00000589294 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms