RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZNF425Q6IV72 752 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 DNAJC22Q8N4W6 341 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 BMPERQ8N8U9 685 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 SNX31Q8N9S9 440 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 OR4K1Q8NGD4 311 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 ESAMQ96AP7 390 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 NXPE2Q96DL1 559 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 THAP11Q96EK4 314 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 SLC46A1Q96NT5 459 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 OR6C1Q96RD1 312 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 DDA1Q9BW61 102 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 EHD1Q9H4M9 534 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 PELI2Q9HAT8 420 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 SLC6A20Q9NP91 592 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 SIDT1Q9NXL6 827 aaKnown RBP18.79■□□□□ 0.6
CIRBP-220ENST00000588917 PISDQ9UG56 409 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 RARRES3Q9UL19 164 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 EMCNQ9ULC0 261 aa18.79■□□□□ 0.6
CIRBP-220ENST00000588917 TRABD2BA6NFA1 517 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 A8MT66 165 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 AGPSO00116 658 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 TYROBPO43914 113 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 DLX3O60479 287 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 SPAG7O75391 227 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 TNFSF15O95150 251 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 EBLN1P0CF75 366 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 C1GALT1C1LP0DN25 315 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 FGF5P12034 268 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 CDH1P12830 882 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 CCL4P13236 92 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 FOLR1P15328 257 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 IMPDH1P20839 514 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 AGTR2P50052 363 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 MAPK10P53779 464 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 ASPHQ12797 758 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 TUBB3Q13509 450 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 LAPTM5Q13571 262 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 COL9A2Q14055 689 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-220ENST00000588917 ZIC1Q15915 447 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 FBXO42Q6P3S6 717 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 NXPE4Q6UWF7 544 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 ZYG11AQ6WRX3 759 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 PAQR7Q86WK9 346 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 PPP1R3BQ86XI6 285 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 MCATQ8IVS2 390 aaKnown RBP18.78■□□□□ 0.6
CIRBP-220ENST00000588917 GPR135Q8IZ08 494 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 TCP10LQ8TDR4 215 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 SREK1Q8WXA9 508 aaKnown RBP18.78■□□□□ 0.6
CIRBP-220ENST00000588917 NEIL2Q969S2 332 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 ZFYVE21Q9BQ24 234 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 C1QTNF3Q9BXJ4 246 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 PITHD1Q9GZP4 211 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-220ENST00000588917 FAM60AQ9NP50 221 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 KLHL20Q9Y2M5 609 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 PCDHGA3Q9Y5H0 932 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 AK5Q9Y6K8 562 aa18.78■□□□□ 0.6
CIRBP-220ENST00000588917 NBEAQ8NFP9 2946 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 ITPR1Q14643 2758 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 KCNE1BA0A087WTH5 132 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 IGKV1-8A0A0C4DH67 115 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 TXNDC9O14530 226 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 TM9SF1O15321 606 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 NVLO15381 856 aaKnown RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 DXOO77932 396 aaKnown RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 EEF1DP29692 281 aaKnown RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 PRKAA2P54646 552 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 RPS15AP62244 130 aaKnown RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 HERVK_113P63132 956 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 YBX1P67809 324 aaKnown RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 SH3BP2P78314 561 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 PCDH1Q08174 1060 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 KCNAB1Q14722 419 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 TCTE1Q5JU00 501 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 ATG9BQ674R7 924 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 MARCH9Q86YJ5 346 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 TEX9Q8N6V9 391 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 PPP4R1Q8TF05 950 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 ZNF501Q96CX3 271 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 AIF1LQ9BQI0 150 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 ERVK-6Q9BXR3 956 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 KCNK9Q9NPC2 374 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 CUEDC1Q9NWM3 386 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 COPG2Q9UBF2 871 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 LAMA5O15230 3695 aa18.77■□□□□ 0.6
CIRBP-220ENST00000588917 COL27A1Q8IZC6 1860 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-220ENST00000588917 G3V2L1 256 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 AGRPO00253 132 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 PRPF4O43172 522 aaKnown RBP eCLIP18.76■□□□□ 0.59
CIRBP-220ENST00000588917 ATP8B1O43520 1251 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 ZWINTO95229 277 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 HGFP14210 728 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 ITIH1P19827 911 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 CASP2P42575 452 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 DNAJB13P59910 316 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 CSNK1G2P78368 415 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 IRF8Q02556 426 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 GTF2H2Q13888 395 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 TBCCQ15814 346 aa18.76■□□□□ 0.59
CIRBP-220ENST00000588917 HIST2H2ACQ16777 129 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms