RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 SIRT5Q9NXA8 310 aa12.74□□□□□ -0.37
DNMT1-207ENST00000586588 THUMPD1Q9NXG2 353 aaKnown RBP12.74□□□□□ -0.37
DNMT1-207ENST00000586588 E2F3O00716 465 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MYL12BO14950 172 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ZNF682O95780 498 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 GLP2RO95838 553 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 C9P02748 559 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 TGFB3P10600 412 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MYL12AP19105 171 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ITGA1P56199 1179 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 HOXC5Q00444 222 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ACVR1Q04771 509 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 DSC3Q14574 896 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ZBTB6Q15916 424 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.37
DNMT1-207ENST00000586588 LRIF1Q5T3J3 769 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 GARNL3Q5VVW2 1013 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 IL27RAQ6UWB1 636 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ANKS3Q6ZW76 656 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 RASAL3Q86YV0 1011 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ZNF680Q8NEM1 530 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MSANTD3Q96H12 275 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 SLC25A51Q9H1U9 297 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 BTN3A3O00478 584 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 TSPAN12O95859 305 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 HMGCLP35914 325 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MAP3K7CLP57077 242 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MAD2L1Q13257 205 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-207ENST00000586588 TMEM132BQ14DG7 1078 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 HKDC1Q2TB90 917 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 LCN1P1Q5VSP4 162 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ARSKQ6UWY0 536 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 LPCAT1Q8NF37 534 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 METTL6Q8TCB7 284 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ERVMER34-1Q9H9K5 563 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 RPS6KA6Q9UK32 745 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 OR51F1A6NGY5 319 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 LGI1O95970 557 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 HLA-DQB1P01920 261 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 HOXD4P09016 255 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-207ENST00000586588 GABRB1P18505 474 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ALDH9A1P49189 494 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 DSTNP60981 165 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 TP53BP2Q13625 1128 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 ZNF267Q14586 743 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-207ENST00000586588 SSX1Q16384 188 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 TTLL9Q3SXZ7 439 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 TRAPPC12Q8WVT3 735 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 EPYCQ99645 322 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 CNPPD1Q9BV87 410 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 DPY30Q9C005 99 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 OSER1Q9NX31 292 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
DNMT1-207ENST00000586588 BPTFQ12830 3046 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 LCTP09848 1927 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 FABP12A6NFH5 140 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 YJEFN3A6XGL0 299 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 WASHC1A8K0Z3 465 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 GFRA2O00451 464 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 BEST1O76090 585 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 DDCP20711 480 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 OGNP20774 298 aaKnown RBP12.72□□□□□ -0.37
DNMT1-207ENST00000586588 MAP2K3P46734 347 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 DAOAP59103 153 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 CYP4F2P78329 520 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 VLDLRP98155 873 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 PAQR3Q6TCH7 311 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 ARMCX2Q7L311 632 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 DDX53Q86TM3 631 aaKnown RBP12.72□□□□□ -0.37
DNMT1-207ENST00000586588 FAM124AQ86V42 546 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 KLHL6Q8WZ60 621 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 MSLNLQ96KJ4 702 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 KCNH6Q9H252 994 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
DNMT1-207ENST00000586588 COQ3Q9NZJ6 369 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 SRRDQ9UH36 339 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 MAN2B2Q9Y2E5 1009 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 HCN1O60741 890 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 SLC43A1O75387 559 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 WARSP23381 471 aaKnown RBP12.72□□□□□ -0.37
DNMT1-207ENST00000586588 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.371e-7■■■■■ 27.8
DNMT1-207ENST00000586588 GPC1P35052 558 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 HTR6P50406 440 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
DNMT1-207ENST00000586588 MED22Q15528 200 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 AANATQ16613 207 aa12.72□□□□□ -0.37
DNMT1-207ENST00000586588 C9orf57Q5W0N0 161 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms