RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ADNP2Q6IQ32 1131 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 IZUMO2Q6UXV1 221 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 RAB42Q8N4Z0 105 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 CHTF18Q8WVB6 975 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 SMPDL3AQ92484 453 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 INSM2Q96T92 566 aaPredicted RBP21.48■■□□□ 1.03
CIRBP-208ENST00000586548 EBPLQ9BY08 206 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 KLHL4Q9C0H6 718 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 CD93Q9NPY3 652 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 PPT2Q9UMR5 302 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 KCNK6Q9Y257 313 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 GPSM3Q9Y4H4 160 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 AP4S1Q9Y587 144 aa21.48■■□□□ 1.03
CIRBP-208ENST00000586548 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 LRRC72A6NJI9 287 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 ARPC2O15144 300 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 CDH1P12830 882 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 GABRG2P18507 467 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 IDSP22304 550 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 PEX2P28328 305 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 ACSL1P33121 698 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 GRIA3P42263 894 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 CTBSQ01459 385 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 LPCAT4Q643R3 524 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 DUS1LQ6P1R4 473 aaKnown RBP21.47■■□□□ 1.03
CIRBP-208ENST00000586548 LPCAT2Q7L5N7 544 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 C1orf52Q8N6N3 182 aaKnown RBP21.47■■□□□ 1.03
CIRBP-208ENST00000586548 STARD8Q92502 1023 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 EGLN2Q96KS0 407 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 FERD3LQ96RJ6 166 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 ECSITQ9BQ95 431 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 COPS7BQ9H9Q2 264 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-208ENST00000586548 PELI2Q9HAT8 420 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 FGF22Q9HCT0 170 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 DMRT3Q9NQL9 472 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 SLC2A4RGQ9NR83 387 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 VAPAQ9P0L0 249 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 EGFL7Q9UHF1 273 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 MAPRE3Q9UPY8 281 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 MYO10Q9HD67 2058 aa21.47■■□□□ 1.03
CIRBP-208ENST00000586548 POM121BA6NF01 834 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 FPGTO14772 594 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 DFNA5O60443 496 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 ERN1O75460 977 aaKnown RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 RPSAP08865 295 aaKnown RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 SRFP11831 508 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PIK3CBP42338 1070 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 HNRNPFP52597 415 aaKnown RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PHC1P78364 1004 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PHEXP78562 749 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 MTAPQ13126 283 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 MLF2Q15773 248 aaPredicted RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 IFNEQ86WN2 208 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 C17orf64Q86WR6 236 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 LILRA2Q8N149 483 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 KRT78Q8N1N4 520 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 ITCHQ96J02 903 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 EFHD1Q9BUP0 239 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 KCNH6Q9H252 994 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PRM3Q9NNZ6 103 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 SIRT5Q9NXA8 310 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 AP3M1Q9Y2T2 418 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PLEKHM1Q9Y4G2 1056 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 A0A096LPI6 279 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PRSS38A1L453 326 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 LATO43561 262 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 HNRNPA2B1P22626 353 aaKnown RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 ASMTP46597 345 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 MTPNP58546 118 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 RAE1P78406 368 aaKnown RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 PLIN5Q00G26 463 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 SELPLGQ14242 412 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 NFATC4Q14934 902 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 AASDHQ4L235 1098 aaPredicted RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 LRIF1Q5T3J3 769 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 GPR180Q86V85 440 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 FAM129CQ86XR2 697 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 C2orf73Q8N5S3 287 aaPredicted RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 OR2M4Q96R27 311 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 SH3GL1Q99961 368 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 SPNS1Q9H2V7 528 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 SERHLQ9NQF3 203 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.46■■□□□ 1.03
CIRBP-208ENST00000586548 TAC3Q9UHF0 121 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 MCM8Q9UJA3 840 aa21.46■■□□□ 1.03
CIRBP-208ENST00000586548 TRBV5-3A0A0A0MS03 114 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 LRATO95237 230 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 TIA1P31483 386 aaKnown RBP eCLIP21.45■■□□□ 1.028e-8■■□□□ 14.4
CIRBP-208ENST00000586548 CLDN2P57739 230 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 SRSF11Q05519 484 aaKnown RBP21.45■■□□□ 1.02
CIRBP-208ENST00000586548 PGS1Q32NB8 556 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 UAP1L1Q3KQV9 507 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 GALNT18Q6P9A2 607 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 MSRB3Q8IXL7 192 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 SLCO4A1Q96BD0 722 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 CAMK1GQ96NX5 476 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 PKP2Q99959 881 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 RAB11FIP5Q9BXF6 653 aa21.45■■□□□ 1.02
CIRBP-208ENST00000586548 PAIP1Q9H074 479 aaKnown RBP21.45■■□□□ 1.02
CIRBP-208ENST00000586548 MVB12BQ9H7P6 319 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms