RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 URI1O94763 535 aaPredicted RBP19.49■□□□□ 0.71
SS18-224ENST00000584083 MED26O95402 600 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 ONECUT2O95948 504 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 ALBP02768 609 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 PGDP52209 483 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 CAV1Q03135 178 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 PRTGQ2VWP7 1150 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 COX15Q7KZN9 410 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 CCDC25Q86WR0 208 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 PLD3Q8IV08 490 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 TEX19Q8NA77 164 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 OR2A5Q96R48 311 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 WDR54Q9H977 334 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 ZNF304Q9HCX3 659 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 TMEM184CQ9NVA4 438 aa19.49■□□□□ 0.71
SS18-224ENST00000584083 G3BP2Q9UN86 482 aaKnown RBP19.49■□□□□ 0.71
SS18-224ENST00000584083 PCSK5Q92824 1860 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 UMODP07911 640 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 CCND1P24385 295 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 HRH2P25021 359 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 RELAQ04206 551 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 KLRB1Q12918 225 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 NKG7Q16617 165 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 HKDC1Q2TB90 917 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 COLEC12Q5KU26 742 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 PRMT9Q6P2P2 845 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 SHISA6Q6ZSJ9 500 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 ZNF572Q7Z3I7 529 aaPredicted RBP19.48■□□□□ 0.71
SS18-224ENST00000584083 C17orf64Q86WR6 236 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 TMEM151BQ8IW70 566 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 CDKL2Q92772 493 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 PDLIM5Q96HC4 596 aaKnown RBP19.48■□□□□ 0.71
SS18-224ENST00000584083 C10orf90Q96M02 699 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 FER1L6-AS2Q96M78 137 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 RHOJQ9H4E5 214 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 SYNPO2LQ9H987 977 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 TXNDC16Q9P2K2 825 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 CTSFQ9UBX1 484 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 CDC23Q9UJX2 597 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 CDC14AQ9UNH5 594 aa19.48■□□□□ 0.71
SS18-224ENST00000584083 RUVBL1Q9Y265 456 aaKnown RBP19.48■□□□□ 0.71
SS18-224ENST00000584083 PCDHGA9Q9Y5G4 932 aaKnown RBP19.48■□□□□ 0.71
SS18-224ENST00000584083 TXNDC9O14530 226 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 GUCA1CO95843 209 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 IGHEP01854 428 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 ZNF37AP17032 561 aaPredicted RBP19.47■□□□□ 0.71
SS18-224ENST00000584083 EMP3P54852 163 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 SLC12A2P55011 1212 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 AP1S2P56377 157 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 TAS2R39P59534 338 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 ZNF460Q14592 562 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 TMEM207Q6UWW9 146 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 C3orf62Q6ZUJ4 267 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 PPP1R32Q7Z5V6 425 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 NKAPQ8N5F7 415 aaKnown RBP19.47■□□□□ 0.71
SS18-224ENST00000584083 ZNF592Q92610 1267 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 VPS39Q96JC1 886 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 SGPP1Q9BX95 441 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 SLC26A1Q9H2B4 701 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 SOX17Q9H6I2 414 aaPredicted RBP19.47■□□□□ 0.71
SS18-224ENST00000584083 SMYD2Q9NRG4 433 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 P4HTMQ9NXG6 502 aa19.47■□□□□ 0.71
SS18-224ENST00000584083 NXT1Q9UKK6 140 aaKnown RBP19.47■□□□□ 0.71
SS18-224ENST00000584083 NUP210LQ5VU65 1888 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 CXorf49A8MYA2 514 aaPredicted RBP19.46■□□□□ 0.71
SS18-224ENST00000584083 PDGFAP04085 211 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 ENO2P09104 434 aaPredicted RBP19.46■□□□□ 0.71
SS18-224ENST00000584083 FBLP22087 321 aaKnown RBP19.46■□□□□ 0.71
SS18-224ENST00000584083 CASRP41180 1078 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 SLC7A5Q01650 507 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 OCA2Q04671 838 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 TLE1Q04724 770 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 ILF2Q12905 390 aaKnown RBP19.46■□□□□ 0.71
SS18-224ENST00000584083 TRADDQ15628 312 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 CAPN13Q6MZZ7 669 aaPredicted RBP19.46■□□□□ 0.71
SS18-224ENST00000584083 C8orf74Q6P047 294 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 FDCSPQ8NFU4 85 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 FBXO25Q8TCJ0 367 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 ATL1Q8WXF7 558 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 HAUS8Q9BT25 410 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 YIPF2Q9BWQ6 316 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 SH2B3Q9UQQ2 575 aa19.46■□□□□ 0.71
SS18-224ENST00000584083 TCRBV9S1A1TA0A576 114 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 PRPF4O43172 522 aaKnown RBP eCLIP19.45■□□□□ 0.7
SS18-224ENST00000584083 CEACAM4O75871 244 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 STATHP02808 62 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 GSTA2P09210 222 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 CDH1P12830 882 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 MMP11P24347 488 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 RPS15AP62244 130 aaKnown RBP19.45■□□□□ 0.7
SS18-224ENST00000584083 CSNK1G2P78368 415 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 DCAF10Q5QP82 559 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 GARNL3Q5VVW2 1013 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 LCTLQ6UWM7 567 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 PRSS58Q8IYP2 241 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 CLEC1AQ8NC01 280 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 PYCR2Q96C36 320 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 FBXL8Q96CD0 374 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 SPSB2Q99619 263 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 EPN3Q9H201 632 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms