RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 STOX2Q9P2F5 926 aaPredicted RBP19.22■□□□□ 0.67
SMG8-204ENST00000580498 SNX24Q9Y343 169 aa19.22■□□□□ 0.67
SMG8-204ENST00000580498 MAU2Q9Y6X3 613 aa19.22■□□□□ 0.67
SMG8-204ENST00000580498 BOD1L1Q8NFC6 3051 aa19.22■□□□□ 0.67
SMG8-204ENST00000580498 LOC105369274A0A096LPK9 316 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 LOC102723532A0A0G2JNH3 316 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 PYCARD-AS1I3L0S3 204 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 ENO2P09104 434 aaPredicted RBP19.21■□□□□ 0.67
SMG8-204ENST00000580498 CXCR2P25025 360 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 AVPR1BP47901 424 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 RBM20Q5T481 1227 aaKnown RBP19.21■□□□□ 0.67
SMG8-204ENST00000580498 ZNF425Q6IV72 752 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 FBXO42Q6P3S6 717 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 AGTRAPQ6RW13 159 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 IGDCC3Q8IVU1 814 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 ZBED8Q8IZ13 594 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 OR4N4Q8N0Y3 316 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 CRB3Q9BUF7 120 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 DRC3Q9H069 523 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 SOX17Q9H6I2 414 aaPredicted RBP19.21■□□□□ 0.67
SMG8-204ENST00000580498 MLXIPLQ9NP71 852 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 SLAMF7Q9NQ25 335 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 C14orf105Q9NVL8 296 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 WHRNQ9P202 907 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 PDE10AQ9Y233 779 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 HEATR5BQ9P2D3 2071 aa19.21■□□□□ 0.67
SMG8-204ENST00000580498 CCDC88CQ9P219 2028 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 PCDH17O14917 1159 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 EIF3HO15372 352 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG8-204ENST00000580498 SAT1P21673 171 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 ITGA3P26006 1051 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 CDKN2DP55273 166 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 CAV1Q03135 178 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 CKAP4Q07065 602 aaKnown RBP19.2■□□□□ 0.66
SMG8-204ENST00000580498 MYBPC3Q14896 1274 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 PRTGQ2VWP7 1150 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 TUBB8Q3ZCM7 444 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 STRA8Q7Z7C7 330 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 NKAPQ8N5F7 415 aaKnown RBP19.2■□□□□ 0.66
SMG8-204ENST00000580498 SPATA4Q8NEY3 305 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 ERP44Q9BS26 406 aa19.2■□□□□ 0.66
SMG8-204ENST00000580498 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG8-204ENST00000580498 MED13Q9UHV7 2174 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 H7BY64 318 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 MAP2K7O14733 419 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 UMODP07911 640 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 FDXRP22570 491 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 RPL21P46778 160 aaKnown RBP19.19■□□□□ 0.66
SMG8-204ENST00000580498 ETF1P62495 437 aaKnown RBP19.19■□□□□ 0.66
SMG8-204ENST00000580498 SKP1P63208 163 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 NAE1Q13564 534 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 DSG2Q14126 1118 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 DUPD1Q68J44 220 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 LCTLQ6UWM7 567 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 PPP1R32Q7Z5V6 425 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 CAMKVQ8NCB2 501 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 STT3BQ8TCJ2 826 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 MMABQ96EY8 250 aaPredicted RBP19.19■□□□□ 0.66
SMG8-204ENST00000580498 PWWP2AQ96N64 755 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 PRAP1Q96NZ9 151 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 OR2A5Q96R48 311 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 SMAD5Q99717 465 aaKnown RBP19.19■□□□□ 0.66
SMG8-204ENST00000580498 DPH5Q9H2P9 285 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 MKKSQ9NPJ1 570 aaPredicted RBP19.19■□□□□ 0.66
SMG8-204ENST00000580498 SLC22A11Q9NSA0 550 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 TRPC4Q9UBN4 977 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 CTSFQ9UBX1 484 aa19.19■□□□□ 0.66
SMG8-204ENST00000580498 RUVBL1Q9Y265 456 aaKnown RBP19.19■□□□□ 0.66
SMG8-204ENST00000580498 E7ESA3 106 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 K7EM74 188 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 VPS4BO75351 444 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 UQCRHP07919 91 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 ZGLP1P0C6A0 271 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 GABRB3P28472 473 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 AP2B1P63010 937 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 FOXK1P85037 733 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 FAM53BQ14153 422 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 TRMT10BQ6PF06 316 aaKnown RBP19.18■□□□□ 0.66
SMG8-204ENST00000580498 FRA10AC1Q70Z53 315 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 COX15Q7KZN9 410 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 ZADH2Q8N4Q0 377 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.18■□□□□ 0.66
SMG8-204ENST00000580498 TSPAN17Q96FV3 270 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 SPSB2Q99619 263 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 NUDT9Q9BW91 350 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 ATG10Q9H0Y0 220 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 C3orf18Q9UK00 162 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 FBXL4Q9UKA2 621 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 ADAMTS6Q9UKP5 1117 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 VPS4AQ9UN37 437 aa19.18■□□□□ 0.66
SMG8-204ENST00000580498 MDC1Q14676 2089 aaKnown RBP19.18■□□□□ 0.66
SMG8-204ENST00000580498 IGKV1-8A0A0C4DH67 115 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 FAM95CA0A1B0GW59 222 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 VSTM2BA6NLU5 285 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 HAT1O14929 419 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 CNOT3O75175 753 aaKnown RBP19.17■□□□□ 0.66
SMG8-204ENST00000580498 SLC35G6P0C7Q6 338 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 ACPPP15309 386 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 RAPSNQ13702 412 aa19.17■□□□□ 0.66
SMG8-204ENST00000580498 SHISA6Q6ZSJ9 500 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms