RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CCR7P32248 378 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 FOXD4Q12950 439 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-205ENST00000571272 UGT8Q16880 541 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 TIGD6Q17RP2 521 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 ATAD3BQ5T9A4 648 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 UBE2UQ5VVX9 321 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 CBLL1Q75N03 491 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 UTS2BQ765I0 119 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 EIF3MQ7L2H7 374 aaKnown RBP16.92■□□□□ 0.3
SCARF1-205ENST00000571272 SYTL1Q8IYJ3 562 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 NXPE1Q8N323 547 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 POP5Q969H6 163 aaKnown RBP16.92■□□□□ 0.3
SCARF1-205ENST00000571272 HTATIP2Q9BUP3 242 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 TTLL2Q9BWV7 592 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 PRM3Q9NNZ6 103 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 CAB39Q9Y376 341 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-205ENST00000571272 TMED5Q9Y3A6 229 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 METTL15A6NJ78 407 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 YY2O15391 372 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 COX7A2P14406 83 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 GRK5P34947 590 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 SLC19A1P41440 591 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 CYP4F2P78329 520 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 BCL2L1Q07817 233 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
SCARF1-205ENST00000571272 BCL2A1Q16548 175 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 INO80DQ53TQ3 878 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-205ENST00000571272 PLD4Q96BZ4 506 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 MMP27Q9H306 513 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 RETREG1Q9H6L5 497 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 CWH43Q9H720 699 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 TMEM184CQ9NVA4 438 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 MBD1Q9UIS9 605 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-205ENST00000571272 KCNE1BA0A087WTH5 132 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 TRBV5-4A0A0C4DH59 114 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 AGAP5A6NIR3 686 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 SNPHO15079 494 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 SEPT4O43236 478 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 KCNK2O95069 426 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 C9P02748 559 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 NTRK1P04629 796 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 MAPK1P28482 360 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 RRM2P31350 389 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 CASP9P55211 416 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 ITGA1P56199 1179 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 FKBP1BP68106 108 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 FAM26DQ5JW98 314 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 MFSD14CQ5VZR4 134 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 FAHD1Q6P587 224 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 CYP2U1Q7Z449 544 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 Q8N9G6 341 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-205ENST00000571272 GPR26Q8NDV2 337 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 BBS2Q9BXC9 721 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 PABPN1LA6NDY0 278 aaKnown RBP16.91■□□□□ 0.3
SCARF1-205ENST00000571272 GPX2P18283 190 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 TNFRSF1BP20333 461 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 CTSKP43235 329 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 IDH2P48735 452 aaKnown RBP16.91■□□□□ 0.3
SCARF1-205ENST00000571272 WNT3P56703 355 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 SF3B4Q15427 424 aaKnown RBP eCLIP16.91■□□□□ 0.34e-7■■■■■ 28.1
SCARF1-205ENST00000571272 NEK10Q6ZWH5 1172 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 APCDD1Q8J025 514 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 PITX2Q99697 317 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 CPNE5Q9HCH3 593 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 KCTD5Q9NXV2 234 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 BTBD3Q9Y2F9 522 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 TESMINQ9Y4I5 508 aa16.91■□□□□ 0.3
SCARF1-205ENST00000571272 BNIP3LO60238 219 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 SCN2BO60939 215 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 SPAM1P38567 509 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 TRPC1P48995 793 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 TPRG1LQ5T0D9 272 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 FRG2Q64ET8 278 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 RFLNAQ6ZTI6 216 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 AKAP14Q86UN6 197 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 KIAA1958Q8N8K9 716 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 OR52J3Q8NH60 311 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 ELMO1Q92556 727 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 HRASLS5Q96KN8 279 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 FRG2BQ96QU4 278 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 MTERF1Q99551 399 aaKnown RBP16.9■□□□□ 0.3
SCARF1-205ENST00000571272 TTPALQ9BTX7 342 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 SP140LQ9H930 580 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 DSCR3O14972 297 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 DNTTP04053 509 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 LAMP1P11279 417 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 ALOX12P18054 663 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 CCND3P30281 292 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-205ENST00000571272 CRYBA2P53672 197 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 CDH18Q13634 790 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 DEPDC1Q5TB30 811 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 HEATR4Q86WZ0 1026 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 VRK3Q8IV63 474 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 CCDC103Q8IW40 242 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 FAM9CQ8IZT9 166 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 FBXO22Q8NEZ5 403 aa16.9■□□□□ 0.3
SCARF1-205ENST00000571272 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms