RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 LINC01555Q8NAE3 123 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 OR2L8Q8NGY9 312 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 DENND1AQ8TEH3 1009 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 THAP4Q8WY91 577 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 SCYL1Q96KG9 808 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 OR6C1Q96RD1 312 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 EGFL8Q99944 293 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 DHRS4Q9BTZ2 278 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ACAT2Q9BWD1 397 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 RAB11FIP5Q9BXF6 653 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 TRIM55Q9BYV6 548 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 DERL2Q9GZP9 239 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ATG10Q9H0Y0 220 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ALG9Q9H6U8 611 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 SPATA7Q9P0W8 599 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 LUZP4Q9P127 313 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ERRFI1Q9UJM3 462 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 PADI1Q9ULC6 663 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 SLC5A6Q9Y289 635 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 KLHL20Q9Y2M5 609 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ZNF451Q9Y4E5 1061 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 PCDHGA9Q9Y5G4 932 aaKnown RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 CELSR2Q9HCU4 2923 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 RP1L1Q8IWN7 2480 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 C21orf140B9A014 251 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 MYO1CO00159 1063 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 SLC16A5O15375 505 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 DPM1O60762 260 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 WISP3O95389 354 aaPredicted RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 SLC16A8O95907 504 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 RECKO95980 971 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 LDLRP01130 860 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 CD1DP15813 335 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 KRT15P19012 456 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 TFEBP19484 476 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 CNTFP26441 200 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PSMB5P28074 263 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PRDX3P30048 256 aaKnown RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 CCL11P51671 97 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PNLIPRP1P54315 467 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 ATP6V0D1P61421 351 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 SP140Q13342 867 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 ELOAQ14241 798 aaKnown RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 IL11RAQ14626 422 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 THEMIS2Q5TEJ8 643 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 CYB5D1Q6P9G0 228 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 SLC34A3Q8N130 599 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PDLIM5Q96HC4 596 aaKnown RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 CCDC138Q96M89 665 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 TSNARE1Q96NA8 513 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 MIPEPQ99797 713 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 ACTL8Q9H568 366 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 ZNF768Q9H5H4 540 aaKnown RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 NMRAL1Q9HBL8 299 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PCMTD2Q9NV79 361 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 SOHLH2Q9NX45 425 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 SIDT1Q9NXL6 827 aaKnown RBP12.79□□□□□ -0.36
CCDC40-205ENST00000571028 OR6C2Q9NZP2 312 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 PCDHGA6Q9Y5G7 932 aa12.79□□□□□ -0.36
CCDC40-205ENST00000571028 FBN2P35556 2912 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 DOPEY1Q5JWR5 2465 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 IGHV5-51A0A0C4DH38 117 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 A0A1W2PPM1 405 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 SLC9B1P1A6NJY1 282 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 C9P02748 559 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 PEBP1P30086 187 aaKnown RBP12.78□□□□□ -0.36
CCDC40-205ENST00000571028 RPA3P35244 121 aaPredicted RBP12.78□□□□□ -0.36
CCDC40-205ENST00000571028 CHAF1BQ13112 559 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 NAE1Q13564 534 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 KCNAB1Q14722 419 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 OR4D1Q15615 310 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
CCDC40-205ENST00000571028 CYP2A13Q16696 494 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 FBXO48Q5FWF7 155 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 CPZQ66K79 652 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 JMJD6Q6NYC1 403 aaPredicted RBP12.78□□□□□ -0.36
CCDC40-205ENST00000571028 AGTRAPQ6RW13 159 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 GPSM1Q86YR5 675 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 CYP4X1Q8N118 509 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 PLD6Q8N2A8 252 aaKnown RBP12.78□□□□□ -0.36
CCDC40-205ENST00000571028 CT55Q8WUE5 264 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 ZNF480Q8WV37 535 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 SMPDL3AQ92484 453 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 PTERQ96BW5 349 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 TCTN2Q96GX1 697 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 UBXN10Q96LJ8 280 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 OR2A14Q96R47 310 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 MENTQ9BUN1 341 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 ZNF358Q9NW07 568 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 CD274Q9NZQ7 290 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 STOX2Q9P2F5 926 aaPredicted RBP12.78□□□□□ -0.36
CCDC40-205ENST00000571028 EPHA6Q9UF33 1036 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 POMT2Q9UKY4 750 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 RNF112Q9ULX5 631 aa12.78□□□□□ -0.36
CCDC40-205ENST00000571028 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms