RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 TAGLN2P37802 199 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 GPR12P47775 334 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 PPP2R2BQ00005 443 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 DDX39BQ13838 428 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 LPIN1Q14693 890 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 USP41Q3LFD5 358 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 USH1GQ495M9 461 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 FAM98BQ52LJ0 330 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 KLHL26Q53HC5 615 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 LRRC73Q5JTD7 316 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 CES5AQ6NT32 575 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 PODNL1Q6PEZ8 512 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 C19orf48Q6RUI8 117 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 PRSS42Q7Z5A4 293 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 ADAMTSL2Q86TH1 951 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 TMEM173Q86WV6 379 aaPredicted RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 NUDT13Q86X67 352 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 PM20D2Q8IYS1 436 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 LRRC43Q8N309 656 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 CIARTQ8N365 385 aaPredicted RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 ZCCHC7Q8N3Z6 543 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 MNS1Q8NEH6 495 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 OR13C2Q8NGS9 318 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 METTL21AQ8WXB1 218 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 TRIB2Q92519 343 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 EDEM2Q9BV94 578 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 ZNF416Q9BWM5 594 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 RAB33BQ9H082 229 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 LSG1Q9H089 658 aaKnown RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 TMEM117Q9H0C3 514 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 FN3KQ9H479 309 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 MVB12BQ9H7P6 319 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 LRRC40Q9H9A6 602 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 ZNF334Q9HCZ1 680 aaPredicted RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 GLRX2Q9NS18 164 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 HOMER3Q9NSC5 361 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 SMPD3Q9NY59 655 aaPredicted RBP4.48□□□□□ -1.69
CHD9-220ENST00000569794 SMARCAL1Q9NZC9 954 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 KCNN3Q9UGI6 736 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 MAD2L2Q9UI95 211 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 PLA2G4CQ9UP65 541 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 EXOC6BQ9Y2D4 811 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 CEPT1Q9Y6K0 416 aa4.48□□□□□ -1.69
CHD9-220ENST00000569794 WDR19Q8NEZ3 1342 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 IGKV3D-15A0A087WSY6 115 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 A0A096LPK6 155 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 A0A1B0GWJ7 208 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 F8WDY8 70 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 TLR4O00206 839 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 NEMFO60524 1076 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 GAGE7O76087 117 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 KDM4BO94953 1096 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 GAGE12FP0CL80 117 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 GAGE12GP0CL81 117 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 GAGE12IP0CL82 117 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 FGF5P12034 268 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 TCF4P15884 667 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 ACP1P24666 158 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 ACAT1P24752 427 aaKnown RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 YWHAQP27348 245 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 METAP1P53582 386 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 VCPP55072 806 aaKnown RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 FAM27E3Q08E93 113 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 PPP1R8Q12972 351 aaKnown RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 GAGE1Q13065 139 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 GAGE4Q13068 117 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 SPP2Q13103 211 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 PLD1Q13393 1074 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 CDO1Q16878 200 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 TCTN1Q2MV58 587 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 ATP13A5Q4VNC0 1218 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 SOWAHCQ53LP3 525 aaPredicted RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 LDLRAP1Q5SW96 308 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 ARHGAP17Q68EM7 881 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 PM20D1Q6GTS8 502 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 SULT1C3Q6IMI6 304 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 SLC27A1Q6PCB7 646 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 QSOX2Q6ZRP7 698 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 VASH2Q86V25 355 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 LUZP1Q86V48 1076 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 BBOF1Q8ND07 529 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 GANCQ8TET4 914 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 ATOH1Q92858 354 aaPredicted RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 C14orf79Q96F83 325 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 OTUB1Q96FW1 271 aaPredicted RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 PANX3Q96QZ0 392 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 DDOQ99489 341 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 CCDC77Q9BR77 488 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 S1PR5Q9H228 398 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 RMND5AQ9H871 391 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 EQTNQ9NQ60 294 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 FARSBQ9NSD9 589 aaKnown RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 GRHL1Q9NZI5 618 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 TBC1D7Q9P0N9 293 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 ZMAT5Q9UDW3 170 aaKnown RBP4.47□□□□□ -1.69
CHD9-220ENST00000569794 RCOR1Q9UKL0 485 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 TSPAN16Q9UKR8 245 aa4.47□□□□□ -1.69
CHD9-220ENST00000569794 SPACA6W5XKT8 324 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms