RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 PAQR3Q6TCH7 311 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TPGS1Q6ZTW0 290 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CAND1Q86VP6 1230 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC22A16Q86VW1 577 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GID4Q8IVV7 300 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PARP8Q8N3A8 854 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PHTF2Q8N3S3 785 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PQLC3Q8N755 202 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ASCC1Q8N9N2 400 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GRIN3AQ8TCU5 1115 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 OSTF1Q92882 214 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PSMG2Q969U7 264 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CLCC1Q96S66 551 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PHOX2BQ99453 314 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CST11Q9H112 138 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FOLH1BQ9HBA9 442 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MKKSQ9NPJ1 570 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SNTG1Q9NSN8 517 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NLE1Q9NVX2 485 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FZD4Q9ULV1 537 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SCML2Q9UQR0 700 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CMAHPQ9Y471 501 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDHGA4Q9Y5G9 962 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SPIN1Q9Y657 262 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TCRBV7S3A2A0A539 114 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ANXA2P2A6NMY6 339 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 C9IYK1 514 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 hCG_2039718K7EN88 272 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DCLK1O15075 740 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SPTLC1O15269 473 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 LRRTM2O43300 516 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 HLA-DQB2P05538 268 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ANXA2P07355 339 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MPC1LP0DKB6 136 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF3P17036 446 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SYN1P17600 705 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 AMD1P17707 334 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IVDP26440 423 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 BRCC3P46736 316 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CDK6Q00534 326 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NRG1Q02297 640 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RING1Q06587 406 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TARDBPQ13148 414 aaKnown RBP eCLIP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC13A2Q13183 592 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GPM6BQ13491 265 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NFE2L1Q14494 772 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC9A5Q14940 896 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RABL3Q5HYI8 236 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GPR153Q6NV75 609 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NCEH1Q6PIU2 408 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC36A4Q6YBV0 504 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TMCO2Q7Z6W1 182 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IFNLR1Q8IU57 520 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GALNT12Q8IXK2 581 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PYROXD2Q8N2H3 581 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 FAM156AQ8NDB6 213 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RGMAQ96B86 450 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 L3HYPDHQ96EM0 354 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 AHCYL2Q96HN2 611 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SUSD3Q96L08 255 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RAD9AQ99638 391 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TMEM175Q9BSA9 504 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NDC1Q9BTX1 674 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MRI1Q9BV20 369 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 EVA1AQ9H8M9 152 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NLGN3Q9NZ94 848 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MAP4K5Q9Y4K4 846 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MAB21L2Q9Y586 359 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CDH10Q9Y6N8 788 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 HAS3O00219 553 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MID1O15344 667 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PRODHO43272 600 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TLX3O43711 291 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SOCS5O75159 536 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DNAJB6O75190 326 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 PSKH1P11801 424 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ENGP17813 658 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 HOXD13P35453 343 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 AKR1D1P51857 326 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CXCR4P61073 352 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ACTC1P68032 377 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ACTA1P68133 377 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 IRF9Q00978 393 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC10A7Q0GE19 358 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RASGEF1BQ0VAM2 473 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 EIF4HQ15056 248 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 MSS51Q4VC12 460 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TECRLQ5HYJ1 363 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 ADGRF1Q5T601 910 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 DNM1P34Q6PK57 102 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SYVN1Q86TM6 617 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 TSPYL5Q86VY4 417 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 CCDC28AQ8IWP9 274 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 NPAS3Q8IXF0 933 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SIX5Q8N196 739 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SIDT2Q8NBJ9 832 aaKnown RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 VANGL1Q8TAA9 524 aaPredicted RBP4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 SGCDQ92629 289 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 GATA6Q92908 595 aa4.23□□□□□ -1.73
LPCAT2-208ENST00000566915 RNF31Q96EP0 1072 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms