RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 KLHDC8AQ8IYD2 350 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 MYO1HQ8N1T3 1032 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 OR4K1Q8NGD4 311 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 OR2Y1Q8NGV0 311 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 MCOLN3Q8TDD5 553 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 TM4SF19Q96DZ7 209 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 RBBP8Q99708 897 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 WDR54Q9H977 334 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 NSMCE4AQ9NXX6 385 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 TLK1Q9UKI8 766 aa14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 RUVBL1Q9Y265 456 aaKnown RBP14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
RPUSD1-204ENST00000563560 HYKKA2RU49 373 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 HMX2A2RU54 273 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 H7BY64 318 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 CDC7O00311 574 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 SUV39H1O43463 412 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 FOXS1O43638 330 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 CCNDBP1O95273 360 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 ALBP02768 609 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 SFTPCP11686 197 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 AGXTP21549 392 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 EFNA3P52797 238 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 NKG7Q16617 165 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 KBTBD12Q3ZCT8 623 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 PRAMEF13Q5VWM6 474 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 PLD3Q8IV08 490 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 SHISA5Q8N114 240 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 ABHD11Q8NFV4 315 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 N4BP2L2Q92802 583 aaPredicted RBP14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 UBXN10Q96LJ8 280 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 PRAP1Q96NZ9 151 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 CPNE1Q99829 537 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 C17orf62Q9BQA9 187 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 ARHGAP9Q9BRR9 750 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 FUT8Q9BYC5 575 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 ATG10Q9H0Y0 220 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 CAB39LQ9H9S4 337 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 CCDC177Q9NQR7 707 aaPredicted RBP14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 TMEM184CQ9NVA4 438 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 CTSFQ9UBX1 484 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 SNX7Q9UNH6 387 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 MAN2B2Q9Y2E5 1009 aa14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 MRPS2Q9Y399 296 aaKnown RBP14.11□□□□□ -0.15
RPUSD1-204ENST00000563560 EIF4E1BA6NMX2 242 aaKnown RBP14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 C9J4A7 227 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 LCMT2O60294 686 aaKnown RBP14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 FAM155BO75949 473 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 OR1D4P47884 311 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 CDKL1Q00532 357 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 POU4F1Q01851 419 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 NFATC3Q12968 1075 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 CHAF1BQ13112 559 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 NAE1Q13564 534 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 ATP1A4Q13733 1029 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 SSPNQ14714 243 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 SLC9A5Q14940 896 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 TCTN3Q6NUS6 607 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 C8orf74Q6P047 294 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 MRGPREQ86SM8 312 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 PALM2Q8IXS6 379 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 NKAPQ8N5F7 415 aaKnown RBP14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 AMER3Q8N944 861 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 MESP1Q9BRJ9 268 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 DERL2Q9GZP9 239 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 PCBD2Q9H0N5 130 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 SPNS1Q9H2V7 528 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 TXLNGQ9NUQ3 528 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 IFT80Q9P2H3 777 aaPredicted RBP14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 TP53TG5Q9Y2B4 290 aa14.1□□□□□ -0.15
RPUSD1-204ENST00000563560 NBASA2RRP1 2371 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 CTAGE15A4D2H0 777 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 NPEPPSL1A6NEC2 478 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 RFPL1O75677 317 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 TUBB4AP04350 444 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 NR1D1P20393 614 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 CCND1P24385 295 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 HRH2P25021 359 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 GMPRP36959 345 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 GP5P40197 560 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 SLC26A3P40879 764 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 SLC6A12P48065 614 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 ILF2Q12905 390 aaKnown RBP14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 DLG1Q12959 904 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 EFTUD2Q15029 972 aaKnown RBP eCLIP14.09□□□□□ -0.153e-6■■■■■ 34.9
RPUSD1-204ENST00000563560 FAM214AQ32MH5 1076 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 MLIPQ5VWP3 458 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 CTAGE6Q86UF2 777 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 TTC29Q8NA56 475 aaPredicted RBP14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 C9orf43Q8TAL5 461 aaPredicted RBP14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 FBF1Q8TES7 1133 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 PYCR2Q96C36 320 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 MVB12AQ96EY5 273 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 ING2Q9H160 280 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 ARL15Q9NXU5 204 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 PTRH2Q9Y3E5 179 aaKnown RBP14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 OARD1Q9Y530 152 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 PCDHGA9Q9Y5G4 932 aaKnown RBP14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 CPAMD8Q8IZJ3 1885 aa14.09□□□□□ -0.15
RPUSD1-204ENST00000563560 SHANK1Q9Y566 2161 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms