RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ENTPD5O75356 428 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 F3P13726 295 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 TACR1P25103 407 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 MTTPP55157 894 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PSME3P61289 254 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 RPS13P62277 151 aaKnown RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 RPL6Q02878 288 aaKnown RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 LAPTM5Q13571 262 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 TLR1Q15399 786 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 HIST2H2ACQ16777 129 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 WASHC2DQ5SRD0 308 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 HIST2H2AA3Q6FI13 130 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 C8orf82Q6P1X6 216 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 RIPOR1Q6ZS17 1223 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 HPS6Q86YV9 775 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 FBXW8Q8N3Y1 598 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 ABHD11Q8NFV4 315 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 OR2A1Q8NGT9 310 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 CLHC1Q8NHS4 586 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 REPS1Q96D71 796 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 RAB11FIP5Q9BXF6 653 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 TMED5Q9Y3A6 229 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 A0A1W2PR77 199 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 CCDC154A6NI56 674 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 H7BY64 318 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 AXIN1O15169 862 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PRICKLE3O43900 615 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 DMWDQ09019 674 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 SF1Q15637 639 aaKnown RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PAGE3Q5JUK9 113 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 NOXRED1Q6NXP6 359 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 IYDQ6PHW0 289 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 HACD2Q6Y1H2 254 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PHACTR4Q8IZ21 702 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 KRTCAP2Q8N6L1 136 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PCYOX1LQ8NBM8 494 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 FAM174AQ8TBP5 190 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 C11orf24Q96F05 449 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 FCRL1Q96LA6 429 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PRAP1Q96NZ9 151 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PCED1AQ9H1Q7 454 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PELI2Q9HAT8 420 aa17.37■□□□□ 0.37
COMMD4-208ENST00000563220 PRPF19Q9UMS4 504 aaKnown RBP17.37■□□□□ 0.37
COMMD4-208ENST00000563220 GON4LQ3T8J9 2241 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 FOXE1O00358 373 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-208ENST00000563220 PDGFBP01127 241 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-208ENST00000563220 SDC1P18827 310 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 BCKDHBP21953 392 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 NDUFS1P28331 727 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 PEBP1P30086 187 aaKnown RBP17.36■□□□□ 0.37
COMMD4-208ENST00000563220 DGKQP52824 942 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 PRDX1Q06830 199 aaKnown RBP17.36■□□□□ 0.37
COMMD4-208ENST00000563220 TIGD2Q4W5G0 525 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 COQ5Q5HYK3 327 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 TLDC1Q6P9B6 456 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 TMIGD1Q6UXZ0 262 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 BNC2Q6ZN30 1099 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-208ENST00000563220 LPCAT2Q7L5N7 544 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 VN1R5Q7Z5H4 357 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 NET1Q7Z628 596 aaPredicted RBP17.36■□□□□ 0.37
COMMD4-208ENST00000563220 FAM20CQ8IXL6 584 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 MFSD2AQ8NA29 543 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 OR4E2Q8NGC2 313 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 SLC39A3Q9BRY0 314 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 DPY30Q9C005 99 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 IL1RL2Q9HB29 575 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 SPHK1Q9NYA1 384 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 DLGAP2Q9P1A6 1054 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 TAAR2Q9P1P5 351 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 CROTQ9UKG9 612 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 PCDHB11Q9Y5F2 797 aa17.36■□□□□ 0.37
COMMD4-208ENST00000563220 IGKV1-8A0A0C4DH67 115 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 EEDO75530 441 aaKnown RBP17.35■□□□□ 0.37
COMMD4-208ENST00000563220 TGFB1P01137 390 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 PRPS2P11908 318 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CD38P28907 300 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CCR8P51685 355 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 ZXDAP98168 799 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 C1orf61Q13536 156 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CEACAM7Q14002 265 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 PIGGQ5H8A4 983 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 PARGQ86W56 976 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 SFTPA2Q8IWL1 248 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 KRT78Q8N1N4 520 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 OR4K1Q8NGD4 311 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CHTF18Q8WVB6 975 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 PATE1Q8WXA2 126 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 ROPN1LQ96C74 230 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CXorf40BQ96DE9 158 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 EGLN2Q96KS0 407 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 ANKRD27Q96NW4 1050 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 TSSK3Q96PN8 268 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 EBPLQ9BY08 206 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 GSDMCQ9BYG8 508 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 PRM3Q9NNZ6 103 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 DMRT3Q9NQL9 472 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 C15orf41Q9Y2V0 281 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 MAP3K13O43283 966 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 CIB2O75838 187 aa17.35■□□□□ 0.37
COMMD4-208ENST00000563220 ANP32DO95626 131 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms