RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 EID2BQ96D98 161 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 RBM41Q96IZ5 413 aaKnown RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 NRTNQ99748 197 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 C11orf70Q9BRQ4 267 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 UTP23Q9BRU9 249 aaKnown RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 SELENOOQ9BVL4 669 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 TDRD1Q9BXT4 1180 aaKnown RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 PLA2G12AQ9BZM1 189 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 AMBRA1Q9C0C7 1298 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 POLR1EQ9GZS1 481 aaKnown RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 XKR8Q9H6D3 395 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 PCDH9Q9HC56 1237 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 CUTCQ9NTM9 273 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 EURLQ9NYK6 297 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ZNF282Q9UDV7 671 aaPredicted RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 DNAJC12Q9UKB3 198 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ACSL5Q9ULC5 683 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 RPL26L1Q9UNX3 145 aaKnown RBP5.02□□□□□ -1.61
HERC1-213ENST00000561359 SHOC2Q9UQ13 582 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 NUP210LQ5VU65 1888 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 NBEAL2Q6ZNJ1 2754 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 ABCA1O95477 2261 aa5.02□□□□□ -1.61
HERC1-213ENST00000561359 SHISA3A0PJX4 238 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ANKRD62A6NC57 917 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 MGAT4DA6NG13 374 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ANKRD66B4E2M5 251 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 MAFKO60675 156 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 CLEC3AO75596 197 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 PDE9AO76083 593 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 SUN1O94901 812 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 UBOX5O94941 541 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 CNOT4O95628 575 aaKnown RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 GNA14O95837 355 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ONECUT2O95948 504 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 HPXP02790 462 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 TP53P04637 393 aaPredicted RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 SP1P08047 785 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 MMEP08473 750 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 PIRTP0C851 137 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 UGT2B7P16662 529 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 MMP8P22894 467 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 TACR1P25103 407 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ZNF143P52747 638 aaPredicted RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 CDH6P55285 790 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 FANCCQ00597 558 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 CLCQ05315 142 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 PRKG2Q13237 762 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 PNOCQ13519 176 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 FASTKQ14296 549 aaKnown RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 CA9Q16790 459 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ATP13A5Q4VNC0 1218 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ATP13A4Q4VNC1 1196 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 COBLL1Q53SF7 1204 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 FNBP1LQ5T0N5 605 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 GPRC6AQ5T6X5 926 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 KIAA0930Q6ICG6 404 aaPredicted RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 KLHL10Q6JEL2 608 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ACAD10Q6JQN1 1059 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 SLC25A25Q6KCM7 469 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 HEPHL1Q6MZM0 1159 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ARHGAP11AQ6P4F7 1023 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 SARM1Q6SZW1 724 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 UNC5DQ6UXZ4 953 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 NLRC3Q7RTR2 1065 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 NOP9Q86U38 636 aaKnown RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 HIPK1Q86Z02 1210 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 LIX1LQ8IVB5 337 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ADGRF3Q8IZF5 1079 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 DNAJC22Q8N4W6 341 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 AMER2Q8N7J2 671 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 RASGEF1AQ8N9B8 481 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 FBXO15Q8NCQ5 510 aaPredicted RBP5.01□□□□□ -1.61
HERC1-213ENST00000561359 LRRC46Q96FV0 321 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 PERPQ96FX8 193 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 SCMH1Q96GD3 660 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 CCDC34Q96HJ3 373 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ZNF354BQ96LW1 612 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 RMDN2Q96LZ7 410 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 YIPF4Q9BSR8 244 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ADGRE3Q9BY15 652 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 GPR63Q9BZJ6 419 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 CHRNA10Q9GZZ6 450 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 ATG10Q9H0Y0 220 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 VPS16Q9H269 839 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 EPB41L4BQ9H329 900 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 IL1RAPL1Q9NZN1 696 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 CFAP45Q9UL16 551 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 TMPRSS11EQ9UL52 423 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 HPSEQ9Y251 543 aa5.01□□□□□ -1.61
HERC1-213ENST00000561359 A0A0G2JNJ9 132 aa5□□□□□ -1.61
HERC1-213ENST00000561359 A0A0J9YY10 115 aa5□□□□□ -1.61
HERC1-213ENST00000561359 FITM1A5D6W6 292 aa5□□□□□ -1.61
HERC1-213ENST00000561359 TUBAL3A6NHL2 446 aa5□□□□□ -1.61
HERC1-213ENST00000561359 CLCA1A8K7I4 914 aa5□□□□□ -1.61
HERC1-213ENST00000561359 EIF3CLB5ME19 914 aaKnown RBP5□□□□□ -1.61
HERC1-213ENST00000561359 SYT5O00445 386 aa5□□□□□ -1.61
HERC1-213ENST00000561359 HS6ST1O60243 411 aa5□□□□□ -1.61
HERC1-213ENST00000561359 PRPSAP2O60256 369 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms