RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LRIG1Q96JA1 1093 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 PGLSO95336 258 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 GJB5O95377 273 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 LINGO3P0C6S8 592 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 PRRT3Q5FWE3 981 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 GAL3ST3Q96A11 431 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 CNTN5O94779 1100 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 BDKRB1P46663 353 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 CCT3P49368 545 aaKnown RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 AGTRAPQ6RW13 159 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 SLC5A11Q8WWX8 675 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 GPR174Q9BXC1 333 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 C4BP0C0L5 1744 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 AHSGP02765 367 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 RPS9P46781 194 aaKnown RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 RING1Q06587 406 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 SCARB2Q14108 478 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 DENND5AQ6IQ26 1287 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 SATL1Q86VE3 508 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 MBD2Q9UBB5 411 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
TRAF3-208ENST00000560371 NWD2Q9ULI1 1742 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
TRAF3-208ENST00000560371 LCHNA4D1U4 455 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF3P17036 446 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SLC6A9P48067 706 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 PCBP2Q15366 365 aaKnown RBP eCLIP13.1□□□□□ -0.312e-11■■■■□ 21.7
TRAF3-208ENST00000560371 FAM131AQ6UXB0 335 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 ZC3HC1Q86WB0 502 aaKnown RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CILP2Q8IUL8 1156 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 TMEM109Q9BVC6 243 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 GRHL1Q9NZI5 618 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 B4GALT6Q9UBX8 382 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 AK5Q9Y6K8 562 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CAPN8A6NHC0 703 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SRPRAP08240 638 aaKnown RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CPNE8Q86YQ8 564 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 OR5AK3PQ8NH89 298 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 GRHL3Q8TE85 626 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 COQ8BQ96D53 544 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 PLAGL1Q9UM63 463 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 TMED5Q9Y3A6 229 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF318Q5VUA4 2279 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 DSTNP60981 165 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 KCTD21Q4G0X4 260 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SYVN1Q86TM6 617 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 POLR2CP19387 275 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CREB5Q02930 508 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 DNM1P34Q6PK57 102 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CEACAM20Q6UY09 585 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 RBM44Q6ZP01 1051 aaKnown RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■■■■ 81.2
TRAF3-208ENST00000560371 CBR4Q8N4T8 237 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 KDM3BQ7LBC6 1761 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 BMPR1AP36894 532 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 PIK3CBP42338 1070 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 PTCHD3Q3KNS1 767 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 ZBTB46Q86UZ6 589 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 OXSMQ9NWU1 459 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 CLEC3AO75596 197 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 NADKO95544 446 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 SHMT2P34897 504 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 STARP49675 285 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 HTRA3P83110 453 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 MC1RQ01726 317 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF358Q9NW07 568 aa13.1□□□□□ -0.31
TRAF3-208ENST00000560371 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 FAM149AA5PLN7 773 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 SNX4O95219 450 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 GSTT1P30711 240 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 STK19P49842 368 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-208ENST00000560371 PHOSPHO1Q8TCT1 267 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 KBTBD7Q8WVZ9 684 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 PCYT2Q99447 389 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 EPYCQ99645 322 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 A0A075B6Q4 140 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 WASHC1A8K0Z3 465 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 WASH3PC4AMC7 463 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TSPAN6O43657 245 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 TIMP1P01033 207 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 WASH2PQ6VEQ5 465 aa13.09□□□□□ -0.31
TRAF3-208ENST00000560371 USP30Q70CQ3 517 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms