RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 UBXN7O94888 489 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MT-ND5P03915 603 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 EIF1AXP47813 144 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ERVK-25P63136 954 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NKX6-1P78426 367 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 CEACAM7Q14002 265 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PARP15Q460N3 678 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 C17orf64Q86WR6 236 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MINDY1Q8N5J2 469 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR2T35Q8NGX2 323 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NEIL3Q8TAT5 605 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NECAB3Q96P71 396 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MS4A12Q9NXJ0 267 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NLKQ9UBE8 527 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MRTO4Q9UKD2 239 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PCDHB7Q9Y5E2 793 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF536O15090 1300 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PROS1P07225 676 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 FGF3P11487 239 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 RPIAP49247 311 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PLA2G16P53816 162 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 GRIK2Q13002 908 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 COL9A3Q14050 684 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR4K2Q8NGD2 314 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 CDT1Q9H211 546 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 SYNDIG1Q9H7V2 258 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 TPT1P8Q9HAU6 139 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 CBY1Q9Y3M2 126 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NWD1Q149M9 1564 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PROM1O43490 865 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 TOXO94900 526 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 INSRRP14616 1297 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ACVR2AP27037 513 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MAP3K8P41279 467 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PTGER3P43115 390 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 BAG6P46379 1132 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NRIP1P48552 1158 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MAXP61244 160 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 IRF9Q00978 393 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PRPF38BQ5VTL8 546 aaKnown RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 BEST3Q8N1M1 668 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF676Q8N7Q3 588 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 NAT16Q8N8M0 369 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 PSD4Q8NDX1 1056 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 SENP8Q96LD8 212 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR4K3Q96R72 315 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 RAD9AQ99638 391 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 GPR22Q99680 433 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF649Q9BS31 505 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 MAGIXQ9H6Y5 334 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF395Q9H8N7 513 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 SHPRHQ149N8 1683 aa11.47□□□□□ -0.57
CSPG4P12-201ENST00000558282 UBR1Q8IWV7 1749 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 CXorf49A8MYA2 514 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 RBBP9O75884 186 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 CSN2P05814 226 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 BDNFP23560 247 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 DGKGP49619 791 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 CASP7P55210 303 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 PRAMEF13Q5VWM6 474 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 LCN8Q6JVE9 175 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC30A6Q6NXT4 461 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 SVBPQ8N300 66 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 POGLUT1Q8NBL1 392 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 CNIH3Q8TBE1 160 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 HSH2DQ96JZ2 352 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 PELOQ9BRX2 385 aaKnown RBP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF304Q9HCX3 659 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 CA5BQ9Y2D0 317 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 MEIOCA2RUB1 952 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 NKRFO15226 690 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 MATN3O15232 486 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 XYLBO75191 536 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 C4BPAP04003 597 aaKnown RBP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 HOXD8P13378 290 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 SHMT1P34896 483 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 GAD2Q05329 585 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 ILF3Q12906 894 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 DUOXA1Q1HG43 343 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 MPPE1Q53F39 396 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 NAPRTQ6XQN6 538 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 TMIGD2Q96BF3 282 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC29A3Q9BZD2 475 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 XPNPEP1Q9NQW7 623 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 CD300AQ9UGN4 299 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 C14orf166Q9Y224 244 aaKnown RBP11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF510Q9Y2H8 683 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 DERAQ9Y315 318 aa11.46□□□□□ -0.57
CSPG4P12-201ENST00000558282 B4GALT4O60513 344 aa11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 C8GP07360 202 aa11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 ENGP17813 658 aa11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 GNALP38405 381 aa11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 YBEYP58557 167 aaPredicted RBP11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 ATXN7L2Q5T6C5 722 aaPredicted RBP11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 ATG9BQ674R7 924 aa11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 TSPYL5Q86VY4 417 aaPredicted RBP11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 AQP11Q8NBQ7 271 aa11.46□□□□□ -0.58
CSPG4P12-201ENST00000558282 SPATA22Q8NHS9 363 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms