RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PCDH8O95206 1070 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 CST1P01037 141 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ANXA4P09525 319 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 MAPK1P28482 360 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 GJA4P35212 333 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 RAE1P78406 368 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 ELP6Q0PNE2 266 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SLBPQ14493 270 aaKnown RBP eCLIP10.2□□□□□ -0.78
TPM1-210ENST00000558264 TCEA2Q15560 299 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 GRHL2Q6ISB3 625 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 CES5AQ6NT32 575 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ZCCHC8Q6NZY4 707 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 PRR23BQ6ZRT6 265 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 NLRP8Q86W28 1048 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 HEATR4Q86WZ0 1026 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 APLFQ8IW19 511 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 TRIML2Q8N7C3 387 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 MFSD2AQ8NA29 543 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 OR56A3Q8NH54 315 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 CXorf40AQ8TE69 158 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ATL1Q8WXF7 558 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 RPP25Q9BUL9 199 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 BDH2Q9BUT1 245 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 OR51B5Q9H339 312 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 THG1LQ9NWX6 298 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 SMPD3Q9NY59 655 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 DPP7Q9UHL4 492 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ASF1AQ9Y294 204 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 PRUNE2Q8WUY3 3088 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 GNGT2O14610 69 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 MID1O15344 667 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ERN1O75460 977 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 DIRAS1O95057 198 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 NTRK1P04629 796 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 NPPBP16860 134 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ENGP17813 658 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 WNT3P56703 355 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 GTF2H3Q13889 308 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SPIDRQ14159 915 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 RBBP5Q15291 538 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 SLC36A3Q495N2 470 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ZNF658BQ4V348 819 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 CYBRD1Q53TN4 286 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 DUS1LQ6P1R4 473 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 SLCO4C1Q6ZQN7 724 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 CHPFQ8IZ52 775 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 TMIEQ8NEW7 156 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 ZFP28Q8NHY6 868 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 CSGALNACT1Q8TDX6 532 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 NELL1Q92832 810 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 TESCQ96BS2 214 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SORBS1Q9BX66 1292 aaKnown RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 SFXN1Q9H9B4 322 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 SPATA6Q9NWH7 488 aaPredicted RBP10.2□□□□□ -0.78
TPM1-210ENST00000558264 SH3BP4Q9P0V3 963 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 OR1A2Q9Y585 309 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 KCNE2Q9Y6J6 123 aa10.2□□□□□ -0.78
TPM1-210ENST00000558264 H0Y858 1186 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 H3BSA7 217 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 PSMD11O00231 422 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 VILLO15195 856 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 DEAF1O75398 565 aaPredicted RBP10.19□□□□□ -0.78
TPM1-210ENST00000558264 KAT7O95251 611 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 NUDT7P0C024 238 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 AQP1P29972 269 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 MC1RQ01726 317 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 CSTF3Q12996 717 aaKnown RBP10.19□□□□□ -0.78
TPM1-210ENST00000558264 KCNC3Q14003 757 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 DUSP6Q16828 381 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM1-210ENST00000558264 LRIF1Q5T3J3 769 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 TTC23LQ6PF05 361 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 SPESP1Q6UW49 350 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 ANGPTL8Q6UXH0 198 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 TMEM179BQ7Z7N9 219 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 DHRSXQ8N5I4 330 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 OR4K1Q8NGD4 311 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 PPP1R16AQ96I34 528 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 CCDC115Q96NT0 180 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 SH3GL1Q99961 368 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 MYOCQ99972 504 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 SLC6A17Q9H1V8 727 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 GORASP2Q9H8Y8 452 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 TRIM39Q9HCM9 518 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 TMED5Q9Y3A6 229 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 PCDHGA11Q9Y5H2 935 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 GABRR3A8MPY1 467 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 CLIC1O00299 241 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 B4GAT1O43505 415 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 PAPLNO95428 1278 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 HOXB9P17482 250 aaPredicted RBP10.19□□□□□ -0.78
TPM1-210ENST00000558264 PRPS1L1P21108 318 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 PRPH2P23942 346 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 GZMMP51124 257 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 RUNX3Q13761 415 aa10.19□□□□□ -0.78
TPM1-210ENST00000558264 COL9A2Q14055 689 aaPredicted RBP10.19□□□□□ -0.78
TPM1-210ENST00000558264 CAPN13Q6MZZ7 669 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms