RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TTC23LQ6PF05 361 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 FIGLAQ6QHK4 219 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 AFTPHQ6ULP2 937 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 COX15Q7KZN9 410 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 LMNTD1Q8N9Z9 388 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 TTC29Q8NA56 475 aaPredicted RBP8.28□□□□□ -1.08
VRK1-206ENST00000557222 LINC01555Q8NAE3 123 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 OR11G2Q8NGC1 345 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 HMGCLL1Q8TB92 370 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.28□□□□□ -1.08
VRK1-206ENST00000557222 OSGIN2Q9Y236 505 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 KLF2Q9Y5W3 355 aaPredicted RBP8.28□□□□□ -1.08
VRK1-206ENST00000557222 CCDC168Q8NDH2 2452 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 PDZD2O15018 2839 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 IGLV3-12A0A075B6K2 115 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 CCDC162PA2VCL2 907 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 RASGRF2O14827 1237 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 KPNA5O15131 536 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 PRICKLE3O43900 615 aaPredicted RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 PHF2O75151 1096 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 SUN1O94901 812 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 METTL18O95568 372 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 APOA4P06727 396 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 MYBL2P10244 700 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 ADRA1DP25100 572 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 CCR7P32248 378 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 AP2B1P63010 937 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 OCA2Q04671 838 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 GRB7Q14451 532 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 BRD3Q15059 726 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 POU4F3Q15319 338 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 SF1Q15637 639 aaKnown RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 SKOR2Q2VWA4 1001 aaPredicted RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 AARS2Q5JTZ9 985 aaKnown RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 ATG9BQ674R7 924 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 ZNF324BQ6AW86 544 aaPredicted RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 SP5Q6BEB4 398 aaPredicted RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 MTFR2Q6P444 385 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 FAM180AQ6UWF9 173 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 RAB42Q8N4Z0 105 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 TC2NQ8N9U0 490 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 FAM71DQ8N9W8 422 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 OR13J1Q8NGT2 312 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 OR4L1Q8NH43 312 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 HAS2Q92819 552 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 RAD51AP1Q96B01 352 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 MVB12AQ96EY5 273 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 THOC3Q96J01 351 aaKnown RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 SELENOSQ9BQE4 189 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 SLC39A10Q9ULF5 831 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 CSAG2Q9Y5P2 127 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 FAM169AQ9Y6X4 670 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 PCNX1Q96RV3 2341 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 SETD2Q9BYW2 2564 aaPredicted RBP8.27□□□□□ -1.09
VRK1-206ENST00000557222 F8P00451 2351 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.09
VRK1-206ENST00000557222 ADGRG4Q8IZF6 3080 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 TRAV17A0A0B4J275 112 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 DYTNA2CJ06 578 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 KIAA1324LA8MWY0 1029 aaPredicted RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 MIF4GDA9UHW6 222 aaKnown RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 MASP2O00187 686 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 PRMT5O14744 637 aaPredicted RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 PRPF4O43172 522 aaKnown RBP eCLIP8.26□□□□□ -1.09
VRK1-206ENST00000557222 OR1I1O60431 355 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 JRKO75564 520 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 ZGLP1P0C6A0 271 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 AOAHP28039 575 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 PTGER4P35408 488 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 FDFT1P37268 417 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 CCNFP41002 786 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 GRIA3P42263 894 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 HSPA14Q0VDF9 509 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 Q0VFX4 171 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 KLF1Q13351 362 aaPredicted RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 TMED2Q15363 201 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 MUM1Q2TAK8 710 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 FASTKD1Q53R41 847 aaKnown RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 WASHC2DQ5SRD0 308 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 TSTD2Q5T7W7 516 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 NDUFAF7Q7L592 441 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 LRRC6Q86X45 466 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 KBTBD2Q8IY47 623 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 MPP5Q8N3R9 675 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 UBL4BQ8N7F7 174 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 LRRC57Q8N9N7 239 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 DNAAF3Q8N9W5 541 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 C2CD4AQ8NCU7 369 aaPredicted RBP8.26□□□□□ -1.09
VRK1-206ENST00000557222 DNAJB8Q8NHS0 232 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 SLC35B2Q8TB61 432 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 STT3BQ8TCJ2 826 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 MAGEC3Q8TD91 643 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 ALG3Q92685 438 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 HDAC10Q969S8 669 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 MIEF2Q96C03 454 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 CNDP1Q96KN2 507 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 PANX3Q96QZ0 392 aa8.26□□□□□ -1.09
VRK1-206ENST00000557222 CRB3Q9BUF7 120 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms