RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 TSSK1BQ9BXA7 367 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 ARHGAP39Q9C0H5 1083 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 IL22Q9GZX6 179 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 STN1Q9H668 368 aaKnown RBP6.5□□□□□ -1.37
LINC00871-204ENST00000556886 KIF9Q9HAQ2 790 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 SLC40A1Q9NP59 571 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 OLA1Q9NTK5 396 aaKnown RBP6.5□□□□□ -1.37
LINC00871-204ENST00000556886 ABCF3Q9NUQ8 709 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 TRNAU1APQ9NX07 287 aaKnown RBP6.5□□□□□ -1.37
LINC00871-204ENST00000556886 TMEM161AQ9NX61 479 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 IL37Q9NZH6 218 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 KLHL8Q9P2G9 620 aaPredicted RBP6.5□□□□□ -1.37
LINC00871-204ENST00000556886 SCML2Q9UQR0 700 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 MAD1L1Q9Y6D9 718 aa6.5□□□□□ -1.37
LINC00871-204ENST00000556886 TDRD15B5MCY1 1934 aaKnown RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 PATJQ8NI35 1801 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 FAM92AA1XBS5 289 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 FOXO6A8MYZ6 492 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 I3L4J1 428 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 RTN3O95197 1032 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 HSPA8P11142 646 aaKnown RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CDK4P11802 303 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 NEFHP12036 1026 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 NQO1P15559 274 aaKnown RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 BDNFP23560 247 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 PSMB4P28070 264 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CCND3P30281 292 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 SPRP35270 261 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 MAGEA12P43365 314 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 BRCC3P46736 316 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 ZNF81P51508 661 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 NCALDP61601 193 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 B4GALNT1Q00973 533 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CDH17Q12864 832 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CRYMQ14894 314 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 ZKSCAN8Q15776 578 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 LIPMQ5VYY2 423 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CYB5D1Q6P9G0 228 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 PACS1Q6VY07 963 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 DENND5BQ6ZUT9 1274 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 FAM47EQ6ZV65 393 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 ASRGL1Q7L266 308 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TAC4Q86UU9 113 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 NUDCD3Q8IVD9 361 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 NUP93Q8N1F7 819 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 OR52N4Q8NGI2 321 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 OR10T2Q8NGX3 314 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 GABPB2Q8TAK5 448 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 SLC2A12Q8TD20 617 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CSGALNACT1Q8TDX6 532 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 NDRG1Q92597 394 aaKnown RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 KLHL29Q96CT2 875 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 COQ8BQ96D53 544 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TBC1D31Q96DN5 1066 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CERS2Q96G23 380 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 SPRTNQ9H040 489 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TRPV6Q9H1D0 765 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 ECT2Q9H8V3 914 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 MRM3Q9HC36 420 aaKnown RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 SMYD2Q9NRG4 433 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TMEM30AQ9NV96 361 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TBC1D13Q9NVG8 400 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 SAGE1Q9NXZ1 904 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TUBA8Q9NY65 449 aaPredicted RBP6.49□□□□□ -1.37
LINC00871-204ENST00000556886 CLIC5Q9NZA1 410 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 TXNDC16Q9P2K2 825 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 SLC17A7Q9P2U7 560 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 LNPEPQ9UIQ6 1025 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 VANGL2Q9ULK5 521 aa6.49□□□□□ -1.37
LINC00871-204ENST00000556886 ARHGAP42A6NI28 874 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 FAM90A20PA6NIJ5 464 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 FAM72CH0Y354 149 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 TIMM44O43615 452 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 PIP5K1CO60331 668 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 CCDC22O60826 627 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 SNNO75324 88 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-204ENST00000556886 APOA4P06727 396 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 BPGMP07738 259 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 CSH1P0DML2 217 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 CSH2P0DML3 217 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 GRIA1P42261 906 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 HALP42357 657 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 NDST2P52849 883 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 GEMP55040 296 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 ELF3P78545 371 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-204ENST00000556886 PPARDQ03181 441 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 BTG3Q14201 252 aaPredicted RBP6.48□□□□□ -1.37
LINC00871-204ENST00000556886 SNCBQ16143 134 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 UGP2Q16851 508 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 CCDC153Q494R4 210 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 FAM133BQ5BKY9 247 aaKnown RBP6.48□□□□□ -1.37
LINC00871-204ENST00000556886 FAM72AQ5TYM5 149 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 FAM72DQ6L9T8 149 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 CASC4Q6P4E1 433 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 ZNF793Q6ZN11 406 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 DEF8Q6ZN54 512 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 FAM57BQ71RH2 274 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 SYT13Q7L8C5 426 aa6.48□□□□□ -1.37
LINC00871-204ENST00000556886 NLRP9Q7RTR0 991 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms