RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 UGT3A2Q3SY77 523 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 ELFN2Q5R3F8 820 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 SEL1L3Q68CR1 1132 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 KRT39Q6A163 491 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 PPP1R21Q6ZMI0 780 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 ABI3BPQ7Z7G0 1075 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 ANKRD23Q86SG2 305 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 ZNF554Q86TJ5 538 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 TLK2Q86UE8 772 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 MFN1Q8IWA4 741 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 CCAR2Q8N163 923 aaKnown RBP2.62□□□□□ -1.99
SCFD1-218ENST00000556256 DCLK2Q8N568 766 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 MAPKAPK5-AS1Q8N8E1 139 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 IQUBQ8NA54 791 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 SLC4A11Q8NBS3 891 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 OR1J1Q8NGS3 322 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 OR2T11Q8NH01 316 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 OCC1Q8TAD7 63 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 CCDC107Q8WV48 283 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 SYN2Q92777 582 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-218ENST00000556256 SIPA1Q96FS4 1042 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 RMDN2Q96LZ7 410 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 LINC00167Q96N53 147 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 ZNF558Q96NG5 402 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 RAD9AQ99638 391 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 Q9H8V8 135 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 DNAJC4Q9NNZ3 241 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 SPHK1Q9NYA1 384 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 NUDT4Q9NZJ9 180 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 STK26Q9P289 416 aa2.62□□□□□ -1.99
SCFD1-218ENST00000556256 LOC101059948A0A1B0GTJ6 334 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 SRRM5B3KS81 715 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 AP5Z1O43299 807 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 TBCAO75347 108 aaKnown RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 PIGNO95427 931 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ACSL3O95573 720 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 CLDN1O95832 211 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 PENKP01210 267 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 FDPSP14324 419 aaKnown RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 TCF4P15884 667 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ADRA2CP18825 462 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 EFNA1P20827 205 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ALDH3A2P51648 485 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 PDX1P52945 283 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 NAGLUP54802 743 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 UBASH3AP57075 661 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 RBP5P82980 135 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 MZT1Q08AG7 82 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 NPTX1Q15818 432 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ITPRIPL2Q3MIP1 535 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 PHLDA2Q53GA4 152 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 DCAF10Q5QP82 559 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 HECTD3Q5T447 861 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 FAM47EQ6ZV65 393 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 IL17RELQ6ZVW7 336 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 GALNTL5Q7Z4T8 443 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ARHGAP22Q7Z5H3 698 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 TMEM139Q8IV31 216 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 CFAP206Q8IYR0 622 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 LSMEM2Q8N112 164 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ZNF383Q8NA42 475 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 THAP8Q8NA92 274 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 OR11H4Q8NGC9 324 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 C9orf43Q8TAL5 461 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 FAM162AQ96A26 154 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 NSMCE3Q96MG7 304 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 SPATA33Q96N06 139 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 SPAG5Q96R06 1193 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 MGME1Q9BQP7 344 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 ADPGKQ9BRR6 497 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 PANK3Q9H999 370 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 CDH20Q9HBT6 801 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 SDR39U1Q9NRG7 319 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 GKN1Q9NS71 199 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 INTS9Q9NV88 658 aaKnown RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 DAPK2Q9UIK4 370 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 CPSF3Q9UKF6 684 aaKnown RBP2.61□□□□□ -1.99
SCFD1-218ENST00000556256 MYH15Q9Y2K3 1946 aa2.61□□□□□ -1.99
SCFD1-218ENST00000556256 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 CASTOR2A6NHX0 329 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 ATP6V0E1O15342 81 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 KHDRBS3O75525 346 aaKnown RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 PRKRAO75569 313 aaKnown RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 ATP6AP2O75787 350 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 ZFYP08048 801 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 IGHV4-31P0DP07 118 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 GP1BBP13224 206 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 AZGP1P25311 298 aaKnown RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 PSMA3P25788 255 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 GMPSP49915 693 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 HLCSP50747 726 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 CDR2Q01850 454 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 BFSP1Q12934 665 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 CAPRIN1Q14444 709 aaKnown RBP2.6□□□□□ -1.99
SCFD1-218ENST00000556256 FAM174BQ3ZCQ3 159 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 MCMDC2Q4G0Z9 681 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 C11orf63Q6NUN7 778 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 SPATA19Q7Z5L4 167 aa2.6□□□□□ -1.99
SCFD1-218ENST00000556256 ADCK2Q7Z695 626 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms