RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 DNAJC13O75165 2243 aa8.61□□□□□ -1.03
PRKCH-218ENST00000555628 RTTNQ86VV8 2226 aa8.61□□□□□ -1.03
PRKCH-218ENST00000555628 HEATR5BQ9P2D3 2071 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 LOC105369274A0A096LPK9 316 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 LOC102723532A0A0G2JNH3 316 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 HYKKA2RU49 373 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ISM1B1AKI9 464 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ASNA1O43681 348 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 NEURL1O76050 574 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 AP2A2O94973 939 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 HOXD4P09016 255 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ZFXP17010 805 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ITGALP20701 1170 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 SLC26A3P40879 764 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 NR2C2P49116 596 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ADAM8P78325 824 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 FOLH1Q04609 750 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 LTBQ06643 244 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 GPR33Q49SQ1 333 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ZC3H12BQ5HYM0 836 aaKnown RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 NKAPLQ5M9Q1 402 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 WASHC2DQ5SRD0 308 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ALKBH5Q6P6C2 394 aaKnown RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 PACS1Q6VY07 963 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 NAPRTQ6XQN6 538 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 SERPINA9Q86WD7 417 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 VRK3Q8IV63 474 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 OR4N4Q8N0Y3 316 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 SHISA5Q8N114 240 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 BEST3Q8N1M1 668 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 CHDHQ8NE62 594 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 LILRB4Q8NHJ6 448 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 CA5BP1Q8WTZ4 195 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 CPLX3Q8WVH0 158 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 TFB1MQ8WVM0 346 aaKnown RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 SYN2Q92777 582 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 HDAC10Q969S8 669 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 IL17FQ96PD4 163 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 QKIQ96PU8 341 aaKnown RBP eCLIP8.6□□□□□ -1.034e-10■■■■■ 41.3
PRKCH-218ENST00000555628 PACSIN1Q9BY11 444 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 GBA3Q9H227 469 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 LIME1Q9H400 295 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 VPS37BQ9H9H4 285 aa8.6□□□□□ -1.03
PRKCH-218ENST00000555628 STOX2Q9P2F5 926 aaPredicted RBP8.6□□□□□ -1.03
PRKCH-218ENST00000555628 NKX2-6A6NCS4 301 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 C2orf81A6NN90 581 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 KIAA1324LA8MWY0 1029 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 FOXO6A8MYZ6 492 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 TARM1B6A8C7 271 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 NPIPA5E9PKD4 350 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 FFAR3O14843 346 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 GPR42O15529 346 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 CTAG2O75638 210 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 SMNDC1O75940 238 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ALX3O95076 343 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 CD9P21926 228 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 FBLP22087 321 aaKnown RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 MC4RP32245 332 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 CD96P40200 585 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 CDKN2BP42772 138 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 EMP2P54851 167 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 VSX2P58304 361 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 DYNLT1P63172 113 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ALDH6A1Q02252 535 aaKnown RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 OCA2Q04671 838 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 FAM214AQ32MH5 1076 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 TFDP3Q5H9I0 405 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ABHD17BQ5VST6 288 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 LRRC38Q5VT99 294 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 MFSD7Q6UXD7 560 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ZNF227Q86WZ6 799 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 KRTAP1-3Q8IUG1 177 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 SLC22A15Q8IZD6 547 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 GHDCQ8N2G8 530 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 DNAAF3Q8N9W5 541 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 TTC29Q8NA56 475 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 OR2L8Q8NGY9 312 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 DNAJC1Q96KC8 554 aaKnown RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ALPK1Q96QP1 1244 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 VAT1Q99536 393 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 SMR3AQ99954 134 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ARNT2Q9HBZ2 717 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 C14orf105Q9NVL8 296 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 STMN3Q9NZ72 180 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 KLHL8Q9P2G9 620 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 EGFL7Q9UHF1 273 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ST6GALNAC2Q9UJ37 374 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 NPIPA1Q9UND3 350 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 TDRKHQ9Y2W6 561 aaKnown RBP8.59□□□□□ -1.03
PRKCH-218ENST00000555628 ZNF407Q9C0G0 2248 aa8.59□□□□□ -1.03
PRKCH-218ENST00000555628 LOC100996750A0A140TA64 210 aa8.58□□□□□ -1.04
PRKCH-218ENST00000555628 A0A1W2PPV9 198 aa8.58□□□□□ -1.04
PRKCH-218ENST00000555628 OR2A25A4D2G3 310 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms