RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 DNAJB9Q9UBS3 223 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 TNNQ9UQP3 1299 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 POMT1Q9Y6A1 747 aa4.49□□□□□ -1.69
SCFD1-211ENST00000554437 A0A087WW49 117 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 TRAV34A0A0B4J273 112 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 KRT87PA6NCN2 255 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 SLCO1B7G3V0H7 640 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 OR52Z1P0C646 297 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 IRF2P14316 349 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 CYP11B2P19099 503 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 CD22P20273 847 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ACHEP22303 614 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 CSTF2P33240 577 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PTGER4P35408 488 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ERVK11-1P61568 191 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 POLR2LP62875 67 aaKnown RBP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 HMGN5P82970 282 aaKnown RBP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 C17orf67Q0P5P2 114 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 CUL3Q13618 768 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ITGA7Q13683 1181 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 HNRNPDQ14103 355 aaKnown RBP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 TMEM187Q14656 261 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 HERC3Q15034 1050 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 SLC25A53Q5H9E4 307 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PWWP2BQ6NUJ5 590 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 BHLHB9Q6PI77 547 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 MFN1Q8IWA4 741 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 MMD2Q8IY49 270 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 KIRREL3Q8IZU9 778 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 MARVELD2Q8N4S9 558 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PI4KAP1Q8N8J0 262 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 NIPA2Q8N8Q9 360 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 OR13C3Q8NGS6 347 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 KIF18AQ8NI77 898 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ROBO4Q8WZ75 1007 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PIGBQ92521 554 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 MRPS27Q92552 414 aaKnown RBP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 DYRK2Q92630 601 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 OTUB1Q96FW1 271 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 MAGED4Q96JG8 741 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 CCDC114Q96M63 670 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ATP6V0BQ99437 205 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ASCL2Q99929 193 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PITPNM3Q9BZ71 974 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PRRG4Q9BZD6 226 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 ATAD3AQ9NVI7 634 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 AKAP7Q9P0M2 348 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-211ENST00000554437 TBC1D7Q9P0N9 293 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 CACNG5Q9UF02 275 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 GRID1Q9ULK0 1009 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
SCFD1-211ENST00000554437 MEIOCA2RUB1 952 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 CLDN4O14493 209 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ARPC2O15144 300 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 TXNL1O43396 289 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SEC22BO75396 215 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ZNF821O75541 412 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 DDHD2O94830 711 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 PNPP00491 289 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 FYNP06241 537 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 RNF224P0DH78 156 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SAGP10523 405 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 FDPSP14324 419 aaKnown RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 DARSP14868 501 aaKnown RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ERCC2P18074 760 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SP100P23497 879 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 PTAFRP25105 342 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 BMXP51813 675 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 GCNT1Q02742 428 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 PHKG1Q16816 387 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 TCTE1Q5JU00 501 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SLC35D3Q5M8T2 416 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ADAMTSL4-AS1Q5T5F5 129 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 PSRC1Q6PGN9 363 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 TUSC5Q8IXB3 177 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 MAML2Q8IZL2 1156 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ANKRD20A12PQ8NF67 263 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 OR4K1Q8NGD4 311 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SPATA18Q8TC71 538 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ART5Q96L15 291 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 C16orf45Q96MC5 204 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 ZNF558Q96NG5 402 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 MUS81Q96NY9 551 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SHARPINQ9H0F6 387 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 CDH20Q9HBT6 801 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 MID1IP1Q9NPA3 183 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 PPANQ9NQ55 473 aaKnown RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 HOOK1Q9UJC3 728 aaKnown RBP4.47□□□□□ -1.69
SCFD1-211ENST00000554437 WDR83OSQ9Y284 106 aa4.47□□□□□ -1.69
SCFD1-211ENST00000554437 SYNJ2BP-COX16A0A087WUM0 186 aa4.46□□□□□ -1.7
SCFD1-211ENST00000554437 A0A087X002 238 aa4.46□□□□□ -1.7
SCFD1-211ENST00000554437 ARHGEF37A1IGU5 675 aa4.46□□□□□ -1.7
SCFD1-211ENST00000554437 CEBPBP17676 345 aa4.46□□□□□ -1.7
SCFD1-211ENST00000554437 SCN1BQ07699 218 aa4.46□□□□□ -1.7
SCFD1-211ENST00000554437 KLC1Q07866 573 aa4.46□□□□□ -1.7
SCFD1-211ENST00000554437 CBX3Q13185 183 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms