RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CCDC68Q9H2F9 335 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 SOX17Q9H6I2 414 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 EPS8L2Q9H6S3 715 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 AGPAT4Q9NRZ5 378 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 C14orf105Q9NVL8 296 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ASF1BQ9NVP2 202 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 LUZP4Q9P127 313 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 PLEKHB1Q9UF11 243 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 ZC3H7BQ9UGR2 993 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 MED16Q9Y2X0 877 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 DHRS7Q9Y394 339 aa6.3□□□□□ -1.4
SLIRP-203ENST00000554074 COPG1Q9Y678 874 aaKnown RBP6.3□□□□□ -1.4
SLIRP-203ENST00000554074 NBPF19A0A087WUL8 3843 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 LOC102723996A0A087X1L8 192 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 KRT87PA6NCN2 255 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 ANKUB1A6NFN9 424 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 MAP2K7O14733 419 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 NDC80O14777 642 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 ZBTB14O43829 449 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 NRP2O60462 931 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SLC16A8O95907 504 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 LDLRP01130 860 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 EIF2S1P05198 315 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 FBLP22087 321 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 COILP38432 576 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SLC26A3P40879 764 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 VPS41P49754 854 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 AP2B1P63010 937 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CKAP4Q07065 602 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 MFAP5Q13361 173 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 MRPL49Q13405 166 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 THOC5Q13769 683 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 TLR1Q15399 786 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 NR6A1Q15406 480 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 TRIP13Q15645 432 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 INAQ16352 499 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 LONRF1Q17RB8 773 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 EIF2S3LQ2VIR3 472 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 ANKRD22Q5VYY1 191 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 TTC27Q6P3X3 843 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF549Q6P9A3 640 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CCDC137Q6PK04 289 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SUSD1Q6UWL2 747 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CYHR1Q6ZMK1 362 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 RIPOR1Q6ZS17 1223 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SYDE1Q6ZW31 735 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CISD2Q8N5K1 135 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CSNK1A1LQ8N752 337 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 AMER3Q8N944 861 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 GIMAP7Q8NHV1 300 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 KIF18AQ8NI77 898 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 GABPB2Q8TAK5 448 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 PRR7Q8TB68 274 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF480Q8WV37 535 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SLCO2A1Q92959 643 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 RERGQ96A58 199 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 C19orf60Q96EN9 201 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 THOC3Q96J01 351 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CABS1Q96KC9 395 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SIGLEC10Q96LC7 697 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 SLC30A3Q99726 388 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 TRIM56Q9BRZ2 755 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 FAM167BQ9BTA0 163 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 FAM129AQ9BZQ8 928 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 DRC3Q9H069 523 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 PCBD2Q9H0N5 130 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 ZBTB20Q9HC78 741 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 MKKSQ9NPJ1 570 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 MAP10Q9P2G4 905 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 GALPQ9UBC7 116 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 TAC3Q9UHF0 121 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 C3orf18Q9UK00 162 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 FBXO5Q9UKT4 447 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 NOVA2Q9UNW9 492 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 RUVBL1Q9Y265 456 aaKnown RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 MAU2Q9Y6X3 613 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CACNA1CQ13936 2221 aa6.29□□□□□ -1.4
SLIRP-203ENST00000554074 NCOA6Q14686 2063 aaPredicted RBP6.29□□□□□ -1.4
SLIRP-203ENST00000554074 CROCCQ5TZA2 2017 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 KCNE1BA0A087WTH5 132 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 IGHV1-45A0A0A0MS14 117 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 NSG1A0A0A6YYJ2 146 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 IDSB3KWA1 339 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 H0YIG0 161 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 MASP2O00187 686 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SMAPO00193 183 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SLC16A5O15375 505 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 FOXS1O43638 330 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 TTC4O95801 387 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 SERPINA7P05543 415 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 C8GP07360 202 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 RNF224P0DH78 156 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 COX6A1P12074 109 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 EDN3P14138 238 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CCND1P24385 295 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 CXCR2P25025 360 aa6.28□□□□□ -1.4
SLIRP-203ENST00000554074 IMPA1P29218 277 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms