RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 CTTNBP2NLQ9P2B4 639 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 C19orf25Q9UFG5 118 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-204ENST00000553605 RSPH14Q9UHP6 348 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 A6NNC1 897 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 H0YGG7 62 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 HS6ST1O60243 411 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 RPN2P04844 631 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 GEMP55040 296 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 CSE1LP55060 971 aaKnown RBP13.01□□□□□ -0.33
PRPF39-204ENST00000553605 ARF3P61204 181 aaPredicted RBP13.01□□□□□ -0.33
PRPF39-204ENST00000553605 EXT1Q16394 746 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 DBN1Q16643 649 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 ZNF468Q5VIY5 522 aaPredicted RBP13.01□□□□□ -0.33
PRPF39-204ENST00000553605 ARHGAP11AQ6P4F7 1023 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 LRRC8BQ6P9F7 803 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 KRTAP1-3Q8IUG1 177 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 DCUN1D3Q8IWE4 304 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 PIANPQ8IYJ0 282 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 SLC5A8Q8N695 610 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 OR5M3Q8NGP4 307 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 CFAP61Q8NHU2 1237 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 ZFYVE21Q9BQ24 234 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 VN1R1Q9GZP7 353 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 CDCP1Q9H5V8 836 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 MMP25Q9NPA2 562 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 CRIM1Q9NZV1 1036 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
PRPF39-204ENST00000553605 RUVBL1Q9Y265 456 aaKnown RBP13.01□□□□□ -0.33
PRPF39-204ENST00000553605 ATRQ13535 2644 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 A0A0A6YYC8 382 aaPredicted RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 SOWAHDA6NJG2 315 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 I3L1I5 382 aaPredicted RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 CDK2AP1O14519 115 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 FOXS1O43638 330 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 ANXA9O76027 345 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 PDE9AO76083 593 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 PSMB5P28074 263 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 ADRA1AP35348 466 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 ZFP36L2P47974 494 aaKnown RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 NKX6-1P78426 367 aaPredicted RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 PPP2R2BQ00005 443 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 MAT1AQ00266 395 aaKnown RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 HKDC1Q2TB90 917 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 CMPK2Q5EBM0 449 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 SLC22A15Q8IZD6 547 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 OR2L3Q8NG85 312 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 TMEM125Q96AQ2 219 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 RNF25Q96BH1 459 aaPredicted RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 DNAJC1Q96KC8 554 aaKnown RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 DMRT3Q9NQL9 472 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 IMPACTQ9P2X3 320 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 TRHDEQ9UKU6 1024 aa13□□□□□ -0.33
PRPF39-204ENST00000553605 PHF3Q92576 2039 aaKnown RBP13□□□□□ -0.33
PRPF39-204ENST00000553605 A0A087X0T9 212 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 OR2A25A4D2G3 310 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 H7C0S8 307 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 CYC1P08574 325 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 OR56A5P0C7T3 313 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 FAM228BP0C875 321 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
PRPF39-204ENST00000553605 RFC3P40938 356 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 CYB561P49447 251 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 TAS2R50P59544 299 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 MYL5Q02045 173 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 MINDY4Q4G0A6 757 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 GARNL3Q5VVW2 1013 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 SHEQ5VZ18 495 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 ANKRD37Q7Z713 158 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 PAQR7Q86WK9 346 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 VRK3Q8IV63 474 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 LGI4Q8N135 537 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 CSNK1A1LQ8N752 337 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 OR2A1Q8NGT9 310 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 C16orf52Q8NHV5 167 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 GORASP1Q9BQQ3 440 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 RAB11FIP5Q9BXF6 653 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 DRC3Q9H069 523 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
PRPF39-204ENST00000553605 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 UVRAGQ9P2Y5 699 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 LCMT1Q9UIC8 334 aa12.99□□□□□ -0.33
PRPF39-204ENST00000553605 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
PRPF39-204ENST00000553605 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 NDC80O14777 642 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 VPS26AO75436 327 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 KRT1P04264 644 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 PEX19P40855 299 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 AGTR2P50052 363 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 TYRO3Q06418 890 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 HSPA14Q0VDF9 509 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 ITIH4Q14624 930 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 MESDQ14696 234 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
PRPF39-204ENST00000553605 ODF2Q5BJF6 829 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms