RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 OR2L8Q8NGY9 312 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 ZUFSPQ96AP4 578 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 SPSB2Q99619 263 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 FOXC2Q99958 501 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 TSSK1BQ9BXA7 367 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 INTS7Q9NVH2 962 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 IL1RAPL1Q9NZN1 696 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 TINAGQ9UJW2 476 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 ANAPC5Q9UJX4 755 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 NXT1Q9UKK6 140 aaKnown RBP11.62□□□□□ -0.55
DDX54-206ENST00000549271 PYCARDQ9ULZ3 195 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 PLAGL1Q9UM63 463 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 KLK4Q9Y5K2 254 aa11.62□□□□□ -0.55
DDX54-206ENST00000549271 DYTNA2CJ06 578 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 SDR42E2A6NKP2 422 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 GOLGA8KD6RF30 607 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 GOLGA8TH3BQL2 631 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 DSCR3O14972 297 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 WISP2O76076 250 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
DDX54-206ENST00000549271 MLNP12872 115 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 ALAS2P22557 587 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 RPS3P23396 243 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDX54-206ENST00000549271 MAGEA3P43357 314 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 FNTAP49354 379 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 IST1P53990 364 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 SARNPP82979 210 aaKnown RBP11.61□□□□□ -0.55
DDX54-206ENST00000549271 HSPA14Q0VDF9 509 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 GRM7Q14831 915 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 NKG7Q16617 165 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 ARMC3Q5W041 872 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 KIAA0930Q6ICG6 404 aaPredicted RBP11.61□□□□□ -0.55
DDX54-206ENST00000549271 TTLL10Q6ZVT0 673 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 NAT8LQ8N9F0 302 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 CHDHQ8NE62 594 aaPredicted RBP11.61□□□□□ -0.55
DDX54-206ENST00000549271 HAS2Q92819 552 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 BIRC8Q96P09 236 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 IRAK4Q9NWZ3 460 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 RPH3AQ9Y2J0 694 aaPredicted RBP11.61□□□□□ -0.55
DDX54-206ENST00000549271 ZNF835Q9Y2P0 537 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 MEMO1Q9Y316 297 aa11.61□□□□□ -0.55
DDX54-206ENST00000549271 INTS1Q8N201 2190 aaKnown RBP11.61□□□□□ -0.55
DDX54-206ENST00000549271 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 FAM237BA0A1B0GVD1 139 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 MAGEB16A2A368 324 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 VSTM2BA6NLU5 285 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 GOLGA8MH3BSY2 632 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 RASGRF2O14827 1237 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 SRPX2O60687 465 aaPredicted RBP11.6□□□□□ -0.55
DDX54-206ENST00000549271 NDUFS3O75489 264 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 APOA4P06727 396 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 IGFBP2P18065 325 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 SOX11P35716 441 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 TYSND1Q2T9J0 566 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 FAM214AQ32MH5 1076 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 ANKRD20A4Q4UJ75 823 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 CTSL3PQ5NE16 218 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 FIGLAQ6QHK4 219 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 Q6ZPB1 254 aaPredicted RBP11.6□□□□□ -0.55
DDX54-206ENST00000549271 COX15Q7KZN9 410 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 CREG2Q8IUH2 290 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 FAM20CQ8IXL6 584 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 LMNTD1Q8N9Z9 388 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 HMGCLL1Q8TB92 370 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 PSMF1Q92530 271 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 LPGAT1Q92604 370 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 VPS50Q96JG6 964 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 SIGLEC10Q96LC7 697 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 SERPINB12Q96P63 405 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 RAB11FIP5Q9BXF6 653 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
DDX54-206ENST00000549271 XAB2Q9HCS7 855 aaKnown RBP11.6□□□□□ -0.55
DDX54-206ENST00000549271 CUTCQ9NTM9 273 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 PLA2G3Q9NZ20 509 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 KLHL20Q9Y2M5 609 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 MRFAP1Q9Y605 127 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
DDX54-206ENST00000549271 RTTNQ86VV8 2226 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 GOLGA6L10A0A0M3HER8 536 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 ZCWPW2A0A1B0GU75 182 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 RASAL1O95294 804 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 FOSL1P15407 271 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 IVDP26440 423 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 FMO4P31512 558 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 PPP2R2AP63151 447 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 FOXD4Q12950 439 aaPredicted RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 SF1Q15637 639 aaKnown RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 RNASEH2BQ5TBB1 312 aaKnown RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 PTRHD1Q6GMV3 140 aaKnown RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 MRNIPQ6NTE8 343 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 NEPROQ6NW34 567 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 CASC4Q6P4E1 433 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 CENPUQ71F23 418 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 SDCCAG8Q86SQ7 713 aaPredicted RBP11.59□□□□□ -0.55
DDX54-206ENST00000549271 LRRC6Q86X45 466 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 GRK7Q8WTQ7 553 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 SLCO2A1Q92959 643 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 RAD51AP1Q96B01 352 aa11.59□□□□□ -0.55
DDX54-206ENST00000549271 IL17FQ96PD4 163 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms