RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 HNRNPFP52597 415 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 GAS1P54826 345 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 MTTPP55157 894 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 HNRNPH2P55795 449 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 GCNT1Q02742 428 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 EGR4Q05215 589 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 KEAP1Q14145 624 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 CEBPEQ15744 281 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 CCNYL2Q5T2Q4 361 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 FAM46CQ5VWP2 391 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 C18orf63Q68DL7 685 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ARSKQ6UWY0 536 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 B3GLCTQ6Y288 498 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 MON1BQ7L1V2 547 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ARHGAP22Q7Z5H3 698 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ADAMTSL2Q86TH1 951 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ANKRD46Q86W74 232 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ZC3HC1Q86WB0 502 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 MEX3DQ86XN8 651 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 NRROSQ86YC3 692 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM126BQ8IUX1 230 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 C1orf87Q8N0U7 546 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 AMER3Q8N944 861 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 PPFIBP2Q8ND30 876 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM185AQ8NFB2 350 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 FIG4Q92562 907 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 SSX3Q99909 188 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 DDX50Q9BQ39 737 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 C17orf62Q9BQA9 187 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 IDI2Q9BXS1 227 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 SEMA6AQ9H2E6 1030 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM245Q9H330 911 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 RPF1Q9H9Y2 349 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 FZD3Q9NPG1 666 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 DNPEPQ9ULA0 475 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 SMC3Q9UQE7 1217 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 NUDCQ9Y266 331 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 WDR7Q9Y4E6 1490 aa4.02□□□□□ -1.77
SCAF11-210ENST00000547654 DHX29Q7Z478 1369 aaKnown RBP4.02□□□□□ -1.77
SCAF11-210ENST00000547654 ERICH3Q5RHP9 1530 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 CCDC88BA6NC98 1476 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 HYKKA2RU49 373 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 UBXN8O00124 270 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 LINC01565O15544 149 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 ITM2AO43736 263 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 OR10H2O60403 315 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 IDH1O75874 414 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 GSRP00390 522 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 IGHV2-70P01814 119 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PGK2P07205 417 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 STAG3L1P0CL83 205 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 DNAJB1P25685 340 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 MARCKSP29966 332 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PKLRP30613 574 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 RPL3P39023 403 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 CDX1P47902 265 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TRPC1P48995 793 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 MMP15P51511 669 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 GBX2P52951 348 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 ACTR1AP61163 376 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 LTBQ06643 244 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 ILF2Q12905 390 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TRAF1Q13077 416 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 RAPSNQ13702 412 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PDE7AQ13946 482 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 GIT2Q14161 759 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 NPTX1Q15818 432 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PTGISQ16647 500 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 HERC4Q5GLZ8 1057 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 FAM109BQ6ICB4 259 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PRSS55Q6UWB4 352 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 ARMCX2Q7L311 632 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 LPCAT2Q7L5N7 544 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TMPRSS11BQ86T26 416 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 MIGA1Q8NAN2 632 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 ENGASEQ8NFI3 743 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 OR5M8Q8NGP6 311 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 THAP6Q8TBB0 222 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TMEM174Q8WUU8 243 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 OIT3Q8WWZ8 545 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 SMPDL3BQ92485 455 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 LPAR1Q92633 364 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PYCR2Q96C36 320 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 RHBDF1Q96CC6 855 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 MRPL38Q96DV4 380 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 DTNBP1Q96EV8 351 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 WBP1Q96G27 269 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 WDR77Q9BQA1 342 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TCHPQ9BT92 498 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TPPP3Q9BW30 176 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 CDK19Q9BWU1 502 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 POLDIP3Q9BY77 421 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 PANK2Q9BZ23 570 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 TSPYL1Q9H0U9 437 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 ATG10Q9H0Y0 220 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 MAGEF1Q9HAY2 307 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms