RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 EFCAB14O75071 495 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 EEDO75530 441 aaKnown RBP15.21■□□□□ 0.03
CUX1-211ENST00000546411 RHOP08100 348 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 IGFBP4P22692 258 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 TAS2R41P59536 307 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 MYBPC1Q00872 1141 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 GALNT1Q10472 559 aaPredicted RBP15.21■□□□□ 0.03
CUX1-211ENST00000546411 OR10G2Q8NGC3 310 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 MYEOVQ96EZ4 313 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 CCM2Q9BSQ5 444 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 SLC29A3Q9BZD2 475 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 MARCH7Q9H992 704 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 RPS6KB2Q9UBS0 482 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 ANKRD31Q8N7Z5 1873 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 DENRO43583 198 aaKnown RBP15.21■□□□□ 0.03
CUX1-211ENST00000546411 C6orf47O95873 294 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 CD1EP15812 388 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 DPP6P42658 865 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 MRPL28Q13084 256 aaKnown RBP15.21■□□□□ 0.03
CUX1-211ENST00000546411 SCARB2Q14108 478 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.21■□□□□ 0.038e-7■■■■■ 33
CUX1-211ENST00000546411 LGI4Q8N135 537 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 C19orf18Q8NEA5 215 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 EBF1Q9UH73 591 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 RIMS3Q9UJD0 308 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 KCNK6Q9Y257 313 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 DLGAP4Q9Y2H0 992 aa15.21■□□□□ 0.03
CUX1-211ENST00000546411 FADS2P1A8MWK0 482 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 CACNB4O00305 520 aaPredicted RBP15.21■□□□□ 0.02
CUX1-211ENST00000546411 ADH5P11766 374 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 SRCP12931 536 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 RPL26P61254 145 aaKnown RBP15.21■□□□□ 0.02
CUX1-211ENST00000546411 IRF5Q13568 498 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 DOC2AQ14183 400 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 C7orf61Q8IZ16 206 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 NFKBIDQ8NI38 313 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 RAB2BQ8WUD1 216 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 HDHD2Q9H0R4 259 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 THUMPD1Q9NXG2 353 aaKnown RBP15.21■□□□□ 0.02
CUX1-211ENST00000546411 TMEM181Q9P2C4 612 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 BTBD3Q9Y2F9 522 aa15.21■□□□□ 0.02
CUX1-211ENST00000546411 CARNS1A5YM72 827 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 MROH6A6NGR9 719 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 CCNDBP1O95273 360 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 CCNYL3P0C7X3 344 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 CD36P16671 472 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 BLVRAP53004 296 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 PTSQ03393 145 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 HEPACAMQ14CZ8 416 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 SNAPC1Q16533 368 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 MAL2Q969L2 176 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 TMEM125Q96AQ2 219 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 INSL6Q9Y581 213 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 A0A1B0GVG6 124 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 C7orf72A4D263 438 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ZNF99A8MXY4 864 aaPredicted RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 AP3D1O14617 1153 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 SOX14O95416 240 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 HTR1EP28566 365 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 PRAMEF14Q5SWL7 426 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 DCST1Q5T197 706 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 PRAMEF13Q5VWM6 474 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ZNF57Q68EA5 555 aaPredicted RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 HDDC3Q8N4P3 179 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ISOC1Q96CN7 298 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 APIPQ96GX9 242 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 MYRFLQ96LU7 910 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 INPP5KQ9BT40 448 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ACSL6Q9UKU0 697 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 BACE2Q9Y5Z0 518 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ZNF780BQ9Y6R6 833 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 RTCAO00442 366 aaKnown RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 RPS17P08708 135 aaKnown RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 HSD17B1P14061 328 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 IDSP22304 550 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 TLX1P31314 330 aaPredicted RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 VIPR2P41587 438 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ZNF846Q147U1 533 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 RAB39AQ14964 217 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ATP6AP1Q15904 470 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 UGT2A3Q6UWM9 527 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 KBTBD8Q8NFY9 601 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ADAMTS15Q8TE58 950 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 OVCA2Q8WZ82 227 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 TP53INP1Q96A56 240 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 PHF21AQ96BD5 680 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 GPR78Q96P69 363 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 ABCB9Q9NP78 766 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 SPHK2Q9NRA0 654 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 AASSQ9UDR5 926 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 RBMX2Q9Y388 322 aaKnown RBP15.2■□□□□ 0.02
CUX1-211ENST00000546411 PCDHGB3Q9Y5G1 929 aa15.2■□□□□ 0.02
CUX1-211ENST00000546411 TMCC2O75069 709 aa15.19■□□□□ 0.02
CUX1-211ENST00000546411 PAK4O96013 591 aaPredicted RBP15.19■□□□□ 0.02
CUX1-211ENST00000546411 TNFRSF1BP20333 461 aa15.19■□□□□ 0.02
CUX1-211ENST00000546411 RYKP34925 604 aa15.19■□□□□ 0.02
CUX1-211ENST00000546411 INHBCP55103 352 aa15.19■□□□□ 0.02
CUX1-211ENST00000546411 TEAD4Q15561 434 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms