RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZBTB14O43829 449 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 OPA1O60313 960 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 RFPL1O75677 317 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 UBXN7O94888 489 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CPNE6O95741 557 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SLC16A8O95907 504 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SYF2O95926 243 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TOP3BO95985 862 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 C2P06681 752 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 PROS1P07225 676 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ENO2P09104 434 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 LTA4HP09960 611 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CCDC166P0CW27 439 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ERGP11308 486 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CDK4P11802 303 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TPRP12270 2363 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CD1DP15813 335 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TYRP1P17643 537 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 KRT15P19012 456 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 PDX1P52945 283 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 GFERP55789 205 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 AP1S2P56377 157 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 OR1D5P58170 312 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ATP6V0D1P61421 351 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TBPL1P62380 186 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 RNF4P78317 190 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CLCQ05315 142 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CSHL1Q14406 222 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 GRB7Q14451 532 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 PUM1Q14671 1186 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TSNQ15631 228 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 KCNMB1Q16558 191 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 FAM83EQ2M2I3 478 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 AMZ1Q400G9 498 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CCSMST1Q4G0I0 132 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ANKS6Q68DC2 871 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 KLC3Q6P597 504 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TTC23LQ6PF05 361 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 KLHL35Q6PF15 583 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SBSNQ6UWP8 590 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 DHRS13Q6UX07 377 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 LRIG3Q6UXM1 1119 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 MBOAT1Q6ZNC8 495 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TIFABQ6ZNK6 161 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 RBM44Q6ZP01 1051 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TAX1BP1Q86VP1 789 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 AMIGO1Q86WK6 493 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SPATA6LQ8N4H0 392 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 WDR48Q8TAF3 677 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 KCTD4Q8WVF5 259 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ANKRD7Q92527 254 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 DLG3Q92796 817 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 EXT2Q93063 718 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 RAD51AP1Q96B01 352 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 PTERQ96BW5 349 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 PDLIM5Q96HC4 596 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 AHCYL2Q96HN2 611 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 EAF1Q96JC9 268 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CABS1Q96KC9 395 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 UBXN10Q96LJ8 280 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TSNARE1Q96NA8 513 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 IL17FQ96PD4 163 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ZIM3Q96PE6 472 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 GFM1Q96RP9 751 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 RUFY1Q96T51 708 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 NRTNQ99748 197 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 NUDT22Q9BRQ3 303 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 MENTQ9BUN1 341 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TMEM109Q9BVC6 243 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SLC12A9Q9BXP2 914 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 VPS11Q9H270 941 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 LRRN3Q9H3W5 708 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SRMSQ9H3Y6 488 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TFB2MQ9H5Q4 396 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 XKR8Q9H6D3 395 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ALG9Q9H6U8 611 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 RDH14Q9HBH5 336 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 IGSF5Q9NSI5 407 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 FAM53CQ9NYF3 392 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 UTP6Q9NYH9 597 aaKnown RBP6.12□□□□□ -1.43
PRKDC-211ENST00000546304 OR6C2Q9NZP2 312 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 OGFRQ9NZT2 677 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 SLAMF8Q9P0V8 285 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TLK1Q9UKI8 766 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 PDE10AQ9Y233 779 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 ACOT9Q9Y305 439 aa6.12□□□□□ -1.43
PRKDC-211ENST00000546304 TLDC2A0PJX2 215 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CCDC189A1A4V9 331 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 GSAPA4D1B5 854 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 OR6C74A6NCV1 312 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ZNF839A8K0R7 811 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 GOLGA8RI6L899 631 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 MATN2O00339 956 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 NTN3O00634 580 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 B4GAT1O43505 415 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 KERAO60938 352 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 KLHL2O95198 593 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms