RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 CLEC2LP0C7M8 214 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 ZNF250P15622 560 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 SMPD1P17405 629 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 WARSP23381 471 aaKnown RBP12.46□□□□□ -0.41
PDZD4-209ENST00000544474 SOX6P35712 828 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CSRP3P50461 194 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 RPP38P78345 283 aaKnown RBP12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CARD16Q5EG05 197 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 C10orf111Q8N326 155 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CPA6Q8N4T0 437 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 MAL2Q969L2 176 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CCM2Q9BSQ5 444 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 RAPGEFL1Q9UHV5 662 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 GMEB2Q9UKD1 530 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 PCDHGC4Q9Y5F7 938 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 GPR45Q9Y5Y3 372 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 TCRBV5S2A0A599 114 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CCDC182A6NF36 153 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 METTL15A6NJ78 407 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CREG1O75629 220 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 CD1DP15813 335 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 PTNP21246 168 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 HNF4AP41235 474 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 SEMA3AQ14563 771 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 ABRAXAS2Q15018 415 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
PDZD4-209ENST00000544474 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 ABI3BPQ7Z7G0 1075 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 HMGN2P46Q86SG4 172 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 PROSER1Q86XN7 944 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 STK40Q8N2I9 435 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 LPCAT1Q8NF37 534 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 WDR36Q8NI36 951 aaKnown RBP12.46□□□□□ -0.41
PDZD4-209ENST00000544474 SLC13A3Q8WWT9 602 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 TMCO6Q96DC7 493 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 INPP5KQ9BT40 448 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 MROH8Q9H579 483 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 ACOT13Q9NPJ3 140 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 TLR8Q9NR97 1041 aaKnown RBP12.46□□□□□ -0.41
PDZD4-209ENST00000544474 SLC6A13Q9NSD5 602 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 TREX1Q9NSU2 369 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 ABCD2Q9UBJ2 740 aa12.46□□□□□ -0.41
PDZD4-209ENST00000544474 NOSIPQ9Y314 301 aaKnown RBP12.46□□□□□ -0.41
PDZD4-209ENST00000544474 BPTFQ12830 3046 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 H0YC42 278 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 STX7O15400 261 aaKnown RBP12.46□□□□□ -0.42
PDZD4-209ENST00000544474 KIAA0513O60268 411 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 TPST2O60704 377 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 CNMDO75829 334 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 TOXO94900 526 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 TRAPPC2P0DI81 140 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 TRAPPC2BP0DI82 140 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 ITGALP20701 1170 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 GRK5P34947 590 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 PGFP49763 221 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 PRKCDQ05655 676 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 MFSD10Q14728 455 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 LETMD1Q6P1Q0 360 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 BEND5Q7L4P6 421 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 SLC34A3Q8N130 599 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 AKAP1Q92667 903 aaKnown RBP eCLIP12.46□□□□□ -0.42
PDZD4-209ENST00000544474 HMCESQ96FZ2 354 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 TSGA13Q96PP4 275 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.46□□□□□ -0.42
PDZD4-209ENST00000544474 IPPKQ9H8X2 491 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 CRTAC1Q9NQ79 661 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 CTPS2Q9NRF8 586 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 TAS2R13Q9NYV9 303 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 WWOXQ9NZC7 414 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 COMMD3Q9UBI1 195 aa12.46□□□□□ -0.42
PDZD4-209ENST00000544474 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.42
PDZD4-209ENST00000544474 BTN3A3O00478 584 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 NDUFA2O43678 99 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 PI15O43692 258 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 FCER2P06734 321 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 POU3F3P20264 500 aaPredicted RBP12.45□□□□□ -0.42
PDZD4-209ENST00000544474 SOX3P41225 446 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 BRCC3P46736 316 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 XKRXQ6PP77 449 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 RANBP10Q6VN20 620 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 CREB3L2Q70SY1 520 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 SAMD14Q8IZD0 417 aaPredicted RBP12.45□□□□□ -0.42
PDZD4-209ENST00000544474 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 DNASE1L2Q92874 299 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 DIRAS2Q96HU8 199 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 MUC13Q9H3R2 512 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 NSUN3Q9H649 340 aaKnown RBP12.45□□□□□ -0.42
PDZD4-209ENST00000544474 REEP1Q9H902 201 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 CATSPERZQ9NTU4 200 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 MRPS7Q9Y2R9 242 aaKnown RBP12.45□□□□□ -0.42
PDZD4-209ENST00000544474 ZNF638Q14966 1978 aaKnown RBP12.45□□□□□ -0.42
PDZD4-209ENST00000544474 LRRTM2O43300 516 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 MAFKO60675 156 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 SOX14O95416 240 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 TSPAN19P0C672 248 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 CDH18Q13634 790 aa12.45□□□□□ -0.42
PDZD4-209ENST00000544474 ZNF57Q68EA5 555 aaPredicted RBP12.45□□□□□ -0.42
PDZD4-209ENST00000544474 TMEM65Q6PI78 240 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms