RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 IL1RAPQ9NPH3 570 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 OR6C75A6NL08 312 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 M0QX08 132 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 DNAJB6O75190 326 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 PRKRAO75569 313 aaKnown RBP10.23□□□□□ -0.77
CALU-206ENST00000542996 LDLRP01130 860 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 GSTM2P28161 218 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 IMPA1P29218 277 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 TTPAP49638 278 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 NUDT6P53370 316 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 PTPN5P54829 565 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 PLEKHG6Q3KR16 790 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.23□□□□□ -0.77
CALU-206ENST00000542996 LILRA6Q6PI73 481 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 TSPEARQ8WU66 669 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 NEIL2Q969S2 332 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 SH3KBP1Q96B97 665 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 SLC47A1Q96FL8 570 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 RAD18Q9NS91 495 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 USE1Q9NZ43 259 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 PCDH17O14917 1159 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 STX7O15400 261 aaKnown RBP10.23□□□□□ -0.77
CALU-206ENST00000542996 BNIP3LO60238 219 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 SEC22BO75396 215 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 ZIC2O95409 532 aaPredicted RBP10.23□□□□□ -0.77
CALU-206ENST00000542996 FCGRTP55899 365 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 FAHD1Q6P587 224 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 GPR141Q7Z602 305 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 C11orf96Q7Z7L8 435 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 NKAPQ8N5F7 415 aaKnown RBP10.23□□□□□ -0.77
CALU-206ENST00000542996 CHPT1Q8WUD6 406 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 TAMM41Q96BW9 452 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 SCRN2Q96FV2 425 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 OR5M11Q96RB7 305 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 CENPOQ9BU64 300 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
CALU-206ENST00000542996 TUBA8Q9NY65 449 aaPredicted RBP10.23□□□□□ -0.77
CALU-206ENST00000542996 RHCGQ9UBD6 479 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 POU2F3Q9UKI9 436 aa10.23□□□□□ -0.77
CALU-206ENST00000542996 H0YAE9 185 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 WWP2O00308 870 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ANXA6P08133 673 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 SELPP16109 830 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 GPX2P18283 190 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 RPS3P23396 243 aaKnown RBP eCLIP10.22□□□□□ -0.779e-8■■□□□ 12.3
CALU-206ENST00000542996 RPIAP49247 311 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 GAS1P54826 345 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 EPS8Q12929 822 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 FOXD4Q12950 439 aaPredicted RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 ATP1A4Q13733 1029 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 NOXRED1Q6NXP6 359 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ATCAYQ86WG3 371 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 C9orf16Q9BUW7 83 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ACOT13Q9NPJ3 140 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 SLC23A2Q9UGH3 650 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 TP53BP1Q12888 1972 aaPredicted RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 TRIM43BA6NCK2 446 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 PABPN1LA6NDY0 278 aaKnown RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 C2orf81A6NN90 581 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 TPST2O60704 377 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ETFAP13804 333 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 FEN1P39748 380 aaKnown RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 BDKRB1P46663 353 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 CLDN8P56748 225 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 RPS26P62854 115 aaKnown RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 GSTM4Q03013 218 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 SELENBP1Q13228 472 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ARHGEF7Q14155 803 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 MICU2Q8IYU8 434 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 C2orf73Q8N5S3 287 aaPredicted RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 ZBTB2Q8N680 514 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 CELF5Q8N6W0 485 aaKnown RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 L3MBTL4Q8NA19 623 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 NXPE3Q969Y0 559 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 TRIM43Q96BQ3 446 aaPredicted RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 NELL2Q99435 816 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 MACROD1Q9BQ69 325 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 LRTM1Q9HBL6 345 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 FKBP14Q9NWM8 211 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ERGIC3Q9Y282 383 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 PCDHGB1Q9Y5G3 927 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 IGKV1-8A0A0C4DH67 115 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 SHISA3A0PJX4 238 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 PTHP01270 115 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 CKMP06732 381 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 MAGP20916 626 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 NKX2-5P52952 324 aaPredicted RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 SYT16Q17RD7 645 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 C2orf27AQ580R0 203 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 GPR32P1Q8NGA4 272 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 ZG16BQ96DA0 208 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 NSMCE2Q96MF7 247 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 THUMPD3Q9BV44 507 aaKnown RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 CDADC1Q9BWV3 514 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 VCX3BQ9H321 246 aa10.22□□□□□ -0.77
CALU-206ENST00000542996 AFF4Q9UHB7 1163 aaKnown RBP10.22□□□□□ -0.77
CALU-206ENST00000542996 RNF6Q9Y252 685 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms