RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GARSP41250 739 aaKnown RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 NR2C2P49116 596 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PEX5P50542 639 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 BLKP51451 505 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TAS2R40P59535 323 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 HNRNPKP61978 463 aaKnown RBP eCLIP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 GALNT2Q10471 571 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PDK1Q15118 436 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 BTBD16Q32M84 506 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TBRG1Q3YBR2 411 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 ARMC12Q5T9G4 340 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 NCBP2-AS2Q69YL0 99 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 LIN54Q6MZP7 749 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 KYAT3Q6YP21 454 aaKnown RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 Q6ZWC4 215 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PTAR1Q7Z6K3 402 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 ABI3BPQ7Z7G0 1075 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 KIAA1328Q86T90 577 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 RFX6Q8HWS3 928 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 CAMK1DQ8IU85 385 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 CCDC13Q8IYE1 715 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 RCOR2Q8IZ40 523 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TEX26Q8N6G2 289 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 FAM71DQ8N9W8 422 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 SAP25Q8TEE9 199 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PDCD6IPQ8WUM4 868 aaKnown RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 THAP4Q8WY91 577 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 RAPGEF5Q92565 580 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 FAF2Q96CS3 445 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 BMFQ96LC9 184 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 UBXN10Q96LJ8 280 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 CAMK1GQ96NX5 476 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 TSGA13Q96PP4 275 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PRR25Q96S07 402 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 BAG1Q99933 345 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 FERMT1Q9BQL6 677 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 MGME1Q9BQP7 344 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 POLR1EQ9GZS1 481 aaKnown RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 NT5MQ9NPB1 228 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 SERTAD4Q9NUC0 356 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 ETNK2Q9NVF9 386 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 RBM22Q9NW64 420 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■■■■□ 23.9
CPSF7-220ENST00000541963 ARGLU1Q9NWB6 273 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 DNPEPQ9ULA0 475 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 UBE2J1Q9Y385 318 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-220ENST00000541963 ALG6Q9Y672 507 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 SLCO1B1Q9Y6L6 691 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 GON4LQ3T8J9 2241 aa5.32□□□□□ -1.56
CPSF7-220ENST00000541963 PLXNA2O75051 1894 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 SPTY2D1-AS1A0A0U1RR47 76 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 BTNL10A8MVZ5 291 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 VWC2LB2RUY7 222 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 H0Y3Z8 333 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PSMD11O00231 422 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 RNF103O00237 685 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CACNB4O00305 520 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 MFSD11O43934 449 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CBFA2T3O75081 653 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 ZNF189O75820 626 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 FAM155BO75949 473 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 KRT38O76015 456 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 TNFP01375 233 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 ELFN1P0C7U0 828 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CTSEP14091 401 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 KELP23276 732 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 EPHA8P29322 1005 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 TNNT3P45378 269 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 DUSP3P51452 185 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CLDN2P57739 230 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 GSDMDP57764 484 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 EEFSECP57772 596 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 RPL26P61254 145 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 TUBB4BP68371 445 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CBX1P83916 185 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 SHC2P98077 582 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 IL9RQ01113 521 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PPIDQ08752 370 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 AP1B1Q10567 949 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 KIF5AQ12840 1032 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 SF3A3Q12874 501 aaKnown RBP eCLIP5.31□□□□□ -1.569e-6■■□□□ 12.4
CPSF7-220ENST00000541963 ILKQ13418 452 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 FHL3Q13643 280 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PDE1CQ14123 709 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 ERCC6LQ2NKX8 1250 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 TFDP3Q5H9I0 405 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PCID2Q5JVF3 399 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 FNDC7Q5VTL7 733 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 C11orf63Q6NUN7 778 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 GCNT7Q6ZNI0 430 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 DPPA4Q7L190 304 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PARGQ86W56 976 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CCDC50Q8IVM0 306 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 SYCE1Q8N0S2 351 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 EID2Q8N6I1 236 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PQLC3Q8N755 202 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PNPLA1Q8N8W4 532 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CCDC112Q8NEF3 446 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 OR1N1Q8NGS0 311 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 EXD1Q8NHP7 514 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 KIAA1524Q8TCG1 905 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms