RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 DNAAF3Q8N9W5 541 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ACVR1CQ8NER5 493 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SUN3Q8TAQ9 357 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 GDAP1Q8TB36 358 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 CCDC110Q8TBZ0 833 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DTX3LQ8TDB6 740 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DENND1AQ8TEH3 1009 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 LCN9Q8WX39 176 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 PSMF1Q92530 271 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 NRGNQ92686 78 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DLG3Q92796 817 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SDCCAG3Q96C92 435 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 MBD6Q96DN6 1003 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ARSGQ96EG1 525 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 C12orf66Q96MD2 445 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 GPR137Q96N19 417 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 CSPG4P5Q96PW8 444 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DMRTA2Q96SC8 542 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ZFYVE21Q9BQ24 234 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SPRTNQ9H040 489 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 WWP1Q9H0M0 922 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SRMSQ9H3Y6 488 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 MAGEE1Q9HCI5 957 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 NLRC4Q9NPP4 1024 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SEPT11Q9NVA2 429 aaKnown RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 RBM22Q9NW64 420 aaKnown RBP eCLIP4.4□□□□□ -1.714e-10■■■■□ 19.9
SNHG1-214ENST00000540865 PLA2G3Q9NZ20 509 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 COQ3Q9NZJ6 369 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 DHCR7Q9UBM7 475 aaKnown RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ST6GALNAC2Q9UJ37 374 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 COA3Q9Y2R0 106 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-214ENST00000540865 ZDHHC9Q9Y397 364 aa4.4□□□□□ -1.71
SNHG1-214ENST00000540865 SPTBP11277 2137 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TMEM191CA6NGB0 347 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 VSTM2BA6NLU5 285 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 FAM171A2A8MVW0 826 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 BTN3A3O00478 584 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 AQP7O14520 342 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ADAM10O14672 748 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 WISP2O76076 250 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ZWINTO95229 277 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 BMP10O95393 424 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 WDPCPO95876 746 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SERPINA7P05543 415 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 HEXAP06865 529 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 MMP2P08253 660 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 HOXD4P09016 255 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 INHBBP09529 407 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SLC35G4P0C7Q5 338 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 PRR35P0CG20 571 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 PVRP15151 417 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CCNCP24863 283 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ADSLP30566 484 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 PCK1P35558 622 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CARSP49589 748 aaKnown RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 MEOX1P50221 254 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CTSCP53634 463 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ARSFP54793 590 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 JAM2P57087 298 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TFF3Q07654 80 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 GALNT2Q10471 571 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 MAMLD1Q13495 774 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 NR1I3Q14994 352 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SYCP1Q15431 976 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CEBPEQ15744 281 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ATP13A5Q4VNC0 1218 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ATP13A4Q4VNC1 1196 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 BOLA3Q53S33 107 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 LDLRAP1Q5SW96 308 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ZDHHC20Q5W0Z9 365 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 PPP1R2P3Q6NXS1 205 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SARM1Q6SZW1 724 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 SPESP1Q6UW49 350 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CLEC9AQ6UXN8 241 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 LCNL1Q6ZST4 164 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CAMKMTQ7Z624 323 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 MILR1Q7Z6M3 343 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 HOOK3Q86VS8 718 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 AMIGO1Q86WK6 493 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 DOLPP1Q86YN1 238 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 MCOLN2Q8IZK6 566 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.39□□□□□ -1.712e-11■■■■■ 59.4
SNHG1-214ENST00000540865 RASGEF1AQ8N9B8 481 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 FBXO15Q8NCQ5 510 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 DDHD1Q8NEL9 900 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 OR2L2Q8NH16 312 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 BRIX1Q8TDN6 353 aaKnown RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 AGAP11Q8TF27 550 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 ASB5Q8WWX0 329 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 C18orf12Q96KH6 178 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 LINC00615Q96LM1 132 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TSGA13Q96PP4 275 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TRIB3Q96RU7 358 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CCM2Q9BSQ5 444 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 GPR63Q9BZJ6 419 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 GANQ9H2C0 597 aa4.39□□□□□ -1.71
SNHG1-214ENST00000540865 TFB2MQ9H5Q4 396 aaKnown RBP4.39□□□□□ -1.71
SNHG1-214ENST00000540865 CNTD2Q9H8S5 307 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms